EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-03500

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr1:183250350-183251350

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:183250779-183250798

TGGCCACTGGAGGGCAGCA

6.58

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_01962	chr1:183250047-183251991	Aorta
SE_36783	chr1:183250505-183253214	HMEC
SE_37234	chr1:183239111-183253693	HSMMtube
SE_46159	chr1:183245276-183251462	Osteoblasts
SE_48814	chr1:183250119-183253812	Right_Atrium
SE_52067	chr1:183250088-183252010	Skeletal_Muscle_Myoblast
SE_55065	chr1:183250344-183251716	Stomach_Smooth_Muscle
SE_56337	chr1:183245088-183251421	u87
SE_63869	chr1:183250074-183252010	HSMM
SE_67565	chr1:183245088-183251421	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I183277

chr1

183246584

183253369

Enhancer Sequence

CTCTCATCAC TGGTTCTCAA CTGAGGGCAA TTTTGCAATT GCCAGGGGAC ATTGGGCAAT 60
GTCTGGACAT TTTTGGATGT CAGGACTGGA GGGAGAGGGT GGCATGCTAC TGGCATCTAG 120
TGGGTGGAGG CTAGGAGTGC TGCTAAACAT CCTACAATGC ACAGGGAAGC CCCCCTCCCC 180
AACACATCTG TTCCCAAATG TCAATTAGTG CCAAGGTTAA AAATCCCTGC TTACAGCCAT 240
GAAAATAAAT CTCTTTCCTA TTCCCAAGCC AGGGACACAC TATCCCAACC AAATATAATA 300
TGGGACTTTT ATGTTTTAAG CCAAAGCACA AAGAGTTCAA GAGTACGGTC TCTGCCACCC 360
TTTCTTGCAG GACCAGTGCA AACATTTAAG TCAGACAAGC GGCCCCAGCA GGGCTTGAGA 420
TCCCACATAT GGCCACTGGA GGGCAGCAGT GACTTCTCCC AGTTTGTCCT ATGAGGCTAA 480
GGCAAGTTTC CAGCCCAACA GCCTGTGGTC TAGGGCAGCC CTGGAGGAGC AGTCAGCTGT 540
TAGGAGCATG TAAATAGGGT CAACAGACGC TAATGGAGCT AGGAGAAAAT GGCTTTTCCT 600
CCTCATTTAG TGTGGAAGGA AATATTAAAA AAGGGGACAC GTGAGCCCCA GCGCCTCACA 660
CAGCGCAGGA GTCGGGAGGC AGCGAGCTCC CTTCCAGCTC CTCTGGGCTA GCCTCCTTCC 720
CCAGGTCACG CTGATCCAGG GCCACGAGCC AGAATGCACA CTCTCTGTCC ACACTCCCCT 780
CCCAGGAATC CGGGCTATGT GAAGCCCGGG CCCTGCAGCC CATCCCAGTT TCCACTGCAT 840
GCAGCCACCA CCTGGACCAT GCCAGGACCT GAGCCCAATC TGACAGCTGT GGCTGCTGAG 900
CTGTCCTTTC TCGGAACCTA AGTGTTCTCC ATTCTCTACC CCACACTGTC CTTTCTCCAT 960
CACATGCAGG TAGACCCTCC CTCTCAGCGA GCACAGGGGA 1000