Tag | Content |
---|
EnhancerAtlas ID | HS059-02421 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:112170420-112172720 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Crx | MA0467.1 | chr1:112170750-112170761 | GAGAGGATTAG | + | 6.02 | FOXP1 | MA0481.2 | chr1:112170874-112170886 | TTCTGTTTACAT | - | 6.92 | FOXP2 | MA0593.1 | chr1:112170875-112170886 | TCTGTTTACAT | - | 6.02 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_11566 | chr1:112156772-112177343 | CD20 | SE_12350 | chr1:112170967-112171676 | CD3 | SE_18422 | chr1:112160331-112176902 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19860 | chr1:112170489-112171955 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_22945 | chr1:112170445-112173701 | CD8_primiary | SE_32554 | chr1:112170445-112172868 | GM12878 | SE_54875 | chr1:112170514-112172235 | Stomach_Smooth_Muscle | SE_58908 | chr1:112130143-112173777 | Ly3 | SE_59762 | chr1:112134662-112182784 | Ly4 | SE_62455 | chr1:112130192-112176999 | Tonsil |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I111627 | chr1 | 112170596 | 112172725 |
|
Enhancer Sequence | AATTTTAATG TTCTTTTATT AAAATGACAA ACATGAGAAA GCTTGTTTTA TAGTATGTAA 60 TAAATATAAA TATTATGTAA AACTAAATTA TTTCAGATAG ATGAGGGGGG TAGTCACATG 120 GTTCTGACTT TGAAAAAACA AAAAAAAAAT CTGTGAATGT TTAGAGCAGT AGCTCTGGAG 180 TTGGGCAGCC TGGGTTTGTG TCCTTGCTTT GCCACTTACT AAGTACATGA TTGGAGGCAA 240 CCTGCTAAAT ATGTGTATGA TTTGATTTTT CTGAACCTTG GCTTCCTTAT TTTTATAAAA 300 GGAGAATAAT ATCTACCCCA TAGGATTGTT GAGAGGATTA GAATAATGTG TAAGACCACT 360 TGGCACATAG GTATTTAATA AAAACTAGCT ATTTTCGTTA AATTTGTTTT TTCTGCCAGT 420 CTCCTCAAGG GCAAGAAATA TCTCATTTTT GTGTTTCTGT TTACATGAAT AAATACTGAA 480 ATGCAAATGG GCTGTGGTGA GCAGTGGCAG CAGGAGGGGA ATGGTGGACA TTCTTTGTGG 540 TAGGAATGGC ATGTGCCAAG ATAGAAAGAA AGTTCAGGAG AAGTTGGAGG ACAGGTGATT 600 AATTTGACAG AAGCCTAGGC TTTTGTATAG TTAGAAAATA TGGAGATAAG GGAGAATTAT 660 GGAGATTGGG GCTAGACTTT TAAGCCATTG AATGCTACGT TGATAAGTGT AGACTTTTTC 720 AGGAGTACAA GCTTTGGTAT GTGGAAAATG ACTTGATAAA AGCATTCATC GAAAAGCAGA 780 TGAATTCGCT TGTAGAGTAA AGAATGAATT GAGGAAGGAA GAGGTTGAAG ACAGGGAATC 840 TGGATTAATA GTAACACAGG TAAGGTAAGA TCTGAGGGTT TAAAGGAAAA CAAAAGGGAG 900 GGTTTTGGAG GAAGTGCTTA GGCTTCATGT TTGTGAAGAT CTGTACAACC AATTTGGAGA 960 TCAAATTCAA AAGAAACAGC CTAGGCTTAC ATGCAGTTAG GCAGCCTTTG AGAGAAGATG 1020 GGACTCAGTA CACTTTGGTT GTTACTATTG TTTTTTTAAA AATTGAAGGA TAAAACATTC 1080 CAAGATTCCT ATCATTTCGT CAGTAAAAAG CATATATTTA TGCTTTTAAA AATATATATG 1140 TACAATCTCC TGCAGTAATT TTATTTAGTT AGCATTTTGA GTTCTTGGTT AACAGGATAT 1200 CCTCGCTTTT AGACTTTGTA TTTCTGGAGC TATTACCTTA AAACTCTTCA CTGTAAGGTG 1260 AAATTCTTCT GCATGTGGTT TTTGTAGCAT TTGTGATTGC TGCAGGACTT TAAAAAAACC 1320 AGTCGTGTGA GCAGAGGTGA TGAGAAGTGA AATACAGACT TCTTGTTTGT TAAGCAGCTT 1380 CTAAGTAAAA TATAGGAGCA AAAAAATGGG AAATTGTGTG TATGATGTTT AGAAAAACAT 1440 TACTTTTAGT GTTCCTGTTT TCTCTCTCAG CCCTGAATTT TCCTAATTAA AAAAAGAGAG 1500 TTTGCAGATG CCATTTTTAG TCATTCTAGA ACCTGACTAG AGCTCTACTC ATACTTTCCA 1560 CTTGACTGAA TAATATAAAG CAAGTTAGCC AGAGATTGAT ATTAATAGTA TTTCTTTTTG 1620 ACTGATAAGT AAACTCACAT GAACTGTGAA TTGTCTGCTC GGTATCTTCC AATGGAGAAA 1680 AGAAGCAACC ACCAATTTAA AAAAATACAG GCTTGTGATA CTTATAAGGT GTTTGCATTT 1740 TTTAAAACAG TGAGTTATCA TACCTTTCTT AATGTTTCTT TTAGTTTCCA AATACTGCCT 1800 AAATTCAGAA ATAAAGTACT TATTATTTTT ATTCAAATCT CTTCCCTTTA AAACTATCCT 1860 TGAAAATATT TTTAAATTAA TAAGCAAATG TAACTCACAG TGCTCGTAGT GTTGGGGATT 1920 GTGTGCGTGT GACTTTTTTT TACAAATACT GTGTTTTTCC TGTGTGAATC TGCAAAAGCC 1980 CAGATCTGGT CAACTGAATG AAATTTCATT TGCTAAAGGG ATCTCAGATA TTCAAAACGA 2040 TGATTTAATG TCTACAAACT ATAAGAGTCT CTTTTAAATA GGTTTGAGGA TACTTCTGCC 2100 TGTTTGTCCA GCAGAATCTG AACTACAGTC ATTCTCTCCC CATCATTCCT ACTCCTTAAA 2160 CTATAGCTGA GAGAATAGCA TAGTCCTTAG TTTGGGCCAT TCTGGCATTG CCACTATGAT 2220 GGCCTGTTGT CTTACATTTT TAGAAACTTG CTTGCATCTT GACAGAAAAA ATAAATTATT 2280 AAATTAAGTA GCTAGCAGTT 2300
|