EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-02409

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr1:111997390-111998340

Target genes

Number: 18
Name	Ensembl ID

CEPT1	ENSG00000134255
DRAM2	ENSG00000156171
CHIA	ENSG00000134216
C1orf88	ENSG00000173947
HIGD1AP12	ENSG00000236012
OVGP1	ENSG00000085465
RP11	ENSG00000260948
Y	ENSG00000199890
ATP5F1	ENSG00000116459
WDR77	ENSG00000116455
C1orf162	ENSG00000143110
RAP1A	ENSG00000116473
ADORA3	ENSG00000121933
RP5	ENSG00000231346
RP4	ENSG00000215867
U6	ENSG00000201028
DDX20	ENSG00000064703
FAM212B	ENSG00000197852

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3

MA0041.1

chr1:111997771-111997783

GATTGTTTTTTT

6.44

Enhancer Sequence

ATTGTAACAA TTGATTTGAT TGCTCCAACT TGTCTTTGGT ATAAATTTAT TTGGGATTTT 60
AACTTAATTT TACAGCATTA TCTCTGTTTG TTAGTAGATC AAATTTTTTG ATGCCTGCTT 120
TATGCCAGGC ACTGTTGCAG TCATACAGTG TTGAACAGTG TTAAGTGCCT GCTGTCCTGG 180
AACATACATT CTGTTGTAGG ATGACAATAA AGAAATGAGT AACTGTATAA TATACTGTTA 240
GGTAATGAAA AGGGTACGAA TAAAAATGAA GCCATGTAAG GCAAGAGTCC CCTGATTAAG 300
TTTATGATTC TCTCTACTAC ATGTACTGCC TTTCTTGGCC CATACCCAAG TATTGCTATG 360
ACTGGAACAT TGGAAACCGA AGATTGTTTT TTTTTTAGCC CTGGAGTCAC CTAAAGTAGC 420
ATTTTCCTAA CTGAAATTGC TAGAAACATT AGTCTCCTCA GACGTCCATA GGTGATAACA 480
ATGTTACATA TGATAGATGT TTCTTGCAAA TTCATATTTA AAATTTGTAT ATTAAAGGCA 540
GTTAAAAAAA ACTGTTGGAA CTTTGTATGG GAAACCAGGT AAAATGTATT TGAGTTTGTA 600
ACCCTGTTGT TCTTATGATA CATCCTGCCA TCCTATGATT CTCAGAAATA CTGTAAAATG 660
CTTTCCTAAA AGCCTGCTCT GGGCCTCCCT TACATCCTGT GAGGCGCGGA GGAAAGACTA 720
AATAAATGTA AATCATGGTT TGCATCCTTT CAGAACACAT GGCCTGGTTA AAGAAAAAGC 780
CATATTTGAA GCATTGTAAT TAGGTGCTAC AGGAATTGAG AATCCTAATA TTTATTCATC 840
CTTTTATATA CATATCACTT TGTAGTTGTT TTTTGCTTGT TTCTTGTGTA AATTTTATCC 900
GGTCTAGTGT CCCATTCGAT AAATAGTATA TTTTGCTGGA CAAATTACTT 950