| Tag | Content |
|---|
EnhancerAtlas ID | HS059-01142 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:33199170-33199980 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RFX1 | MA0509.2 | chr1:33199718-33199734 | TGTCTCCATGGCAACC | - | 6.09 | | RFX1 | MA0509.2 | chr1:33199718-33199734 | TGTCTCCATGGCAACC | + | 6.1 | | RFX2 | MA0600.2 | chr1:33199718-33199734 | TGTCTCCATGGCAACC | + | 6.24 | | RFX2 | MA0600.2 | chr1:33199718-33199734 | TGTCTCCATGGCAACC | - | 6.46 | | RFX5 | MA0510.2 | chr1:33199718-33199734 | TGTCTCCATGGCAACC | - | 6.03 |
|
| | Number of super-enhancer constituents: 1 | ID | Coordinate | Tissue/cell |
| SE_65538 | chr1:33199016-33199805 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 33199200 | 33199977 | | chr1 | 33199623 | 33199836 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I032733 | chr1 | 33199170 | 33200004 |
|
Enhancer Sequence | TATCTGGGCT TGTATATTGG TATATGTACC CACATGTTTG GATGTGCCAC TGTGAAGTGG 60
TGTGTAGGTA GGTTTGTCAA CCTGTCTGTG TCTCAGTGTG TTTGTGTCTA CATCTATGTA 120
GATGTGGGGG TGGGAGCTGG GGTCTCTAAG AGTCCACATC CAGTTGTTCT CCTATCTGTG 180
GGCGGAGAGC TCTGCCCACA CATTTCAATC CCTCCCCCTG CTTCCAGAAG GCCCTGAGTG 240
TGGGTGTTTC ACTCGTAGCC CTGCTCCTGG GCACAGGGCT TGCTGCCGAG GACTGGTGGA 300
GTGCATGTCT GCAAACACCT AGAGAGGGGC TCCAGCCAGC AGCCCCCGAC ATGTAGCCTT 360
CCCAGCTGGC AGACCAGATT GATCATTTTC CTGTTTCTGA GAAGAACCAA GCCCCTCTCT 420
TTGGAGAGCA GAGAGACCTC TGAATCTTGA GGTCAGGAAA TCCCTGCTCT CTCAGCCTAG 480
GTCAGTGTCC ATCTGGCTGA GCTTGTCGTG TTTGTCAGAT GCAGCCAGAC AGCTGGGGAA 540
ACAAAACGTG TCTCCATGGC AACCCGCCTC CGCCTTCGAA CTTGGGCAGT TCAGTGGTTT 600
TGCAGGGCCC CCTTTGGGCC CAGTGCTGGG ATGGGGTGGG TGGTGAGGAT GAGTTAATAA 660
GGCTTCTGCA TATGTGCACT GCAGCCCCAC ACCCCAACAT ACTCAAATAC CTCCACACAC 720
ACTCCTTCCC TAGGTAAAAC TGGATGTTCA GAATGGGGAA ACTGGTTCCC AGAGAGGGCA 780
ATGTCTTGTT GCCCAAGTAC ACACTTAGCA 810
|
