EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS058-00554

Organism

Homo sapiens

Tissue/cell

GM10847

Coordinate

chr1:156451340-156451770

Target genes

Number: 2
Name	Ensembl ID

MEF2D	ENSG00000116604
RP11	ENSG00000260460

dbSUPER

Number of super-enhancer constituents: 30
ID	Coordinate	Tissue/cell

SE_03183	chr1:156449563-156452436	Brain_Angular_Gyrus
SE_04925	chr1:156442957-156476137	Brain_Cingulate_Gyrus
SE_05851	chr1:156442823-156476598	Brain_Hippocampus_Middle
SE_06826	chr1:156443700-156452552	Brain_Hippocampus_Middle_150
SE_07824	chr1:156444206-156476920	Brain_Inferior_Temporal_Lobe
SE_09328	chr1:156448622-156455242	CD14
SE_10496	chr1:156450434-156452114	CD19_Primary
SE_11165	chr1:156449814-156479014	CD20
SE_15064	chr1:156450709-156451913	CD4_Memory_Primary_7pool
SE_17138	chr1:156450520-156451427	CD4p_CD225int_CD127p_Tmem
SE_17525	chr1:156449927-156453551	CD4p_CD25-_CD45RAp_Naive
SE_18052	chr1:156449756-156452245	CD4p_CD25-_CD45ROp_Memory
SE_18886	chr1:156449989-156454873	CD4p_CD25-_Il17-_PMAstim_Th
SE_19364	chr1:156450150-156452263	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20186	chr1:156449941-156452056	CD56
SE_22473	chr1:156449619-156452205	CD8_primiary
SE_32703	chr1:156450528-156452321	GM12878
SE_40614	chr1:156444648-156455540	Left_Ventricle
SE_42136	chr1:156444233-156451952	Lung
SE_48054	chr1:156442802-156481304	Psoas_Muscle
SE_48580	chr1:156451304-156453853	Right_Atrium
SE_50090	chr1:156449419-156452902	Sigmoid_Colon
SE_51078	chr1:156440989-156452153	Skeletal_Muscle
SE_52473	chr1:156450663-156452263	Small_Intestine
SE_54540	chr1:156443093-156451511	Stomach_Smooth_Muscle
SE_58979	chr1:156449810-156478804	Ly3
SE_60601	chr1:156449917-156475935	DHL6
SE_61299	chr1:156450124-156478621	HBL1
SE_61431	chr1:156449469-156496609	Toledo
SE_62421	chr1:156450235-156479388	Tonsil

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I156474

chr1

156444370

156452097

Enhancer Sequence

GAGGCACATC TGGGGGATCT GCAGTAGACC CCAAAGCTGC CCTCTTCATG CTCAAAATAG 60
CTTTACAGAT ACTTGCTTTG TCTTTAAAAT GAATGCAAAT TTTACCTTCT AGTCTAGAGT 120
AAATCTGTCT TCTCTAACAT AAAAATAAGG GACTTTCCTC CAAATCTCTG AGTAGGCCTG 180
TGGCTTCCCG GGCACCCTCT TCGTCAGCAC AAGTTCTGTA TCCCCAAGGT GCACGCACCT 240
CAGTGTGAGA AGCAGGGACA TTCAATTCAC ACAGCACCCT TCAAAGCAGG CACTGACCCC 300
ATTTTGTGGA GGTGGGCACC AAGGCTCGGG AAAGCCTAAG CACCTGCCCA AGGCCATGTG 360
GCCGGTAAAG GTCAGAACTG AATTCCAAAG CTCATGTCCT TCAACAGTTC ACAATGTTGG 420
CTCTCTTTGA 430