Tag | Content |
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EnhancerAtlas ID | HS054-00619 |
Organism | Homo sapiens |
Tissue/cell | FT246 |
Coordinate | chr1:202002950-202004910 |
Target genes | Number: 12 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CREB1 | MA0018.3 | chr1:202004082-202004094 | GGTGACGTCAGC | + | 6.14 | CREB1 | MA0018.3 | chr1:202004082-202004094 | GGTGACGTCAGC | - | 6.14 | Foxq1 | MA0040.1 | chr1:202003046-202003057 | AATAAACAATT | - | 6.02 | NFAT5 | MA0606.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 | NFATC1 | MA0624.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 | NFATC3 | MA0625.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 |
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| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_23058 | chr1:202003070-202004639 | Colon_Crypt_1 | SE_23723 | chr1:202003133-202004433 | Colon_Crypt_2 | SE_24689 | chr1:202003019-202005179 | Colon_Crypt_3 | SE_25977 | chr1:202003098-202005224 | Duodenum_Smooth_Muscle | SE_26730 | chr1:202003201-202004852 | Esophagus | SE_27624 | chr1:202002753-202007729 | Fetal_Intestine | SE_28545 | chr1:202002635-202005490 | Fetal_Intestine_Large | SE_31432 | chr1:202003030-202004833 | Gastric | SE_33417 | chr1:202002752-202008344 | H2171 | SE_33792 | chr1:202002877-202005297 | HCC1954 | SE_34304 | chr1:202003057-202005125 | HCT-116 | SE_34741 | chr1:202002989-202005297 | HeLa | SE_41626 | chr1:202003359-202004353 | LNCaP | SE_43434 | chr1:202002760-202004009 | MCF-7 | SE_43434 | chr1:202004034-202004676 | MCF-7 | SE_50066 | chr1:202002922-202004883 | Sigmoid_Colon | SE_52354 | chr1:202003018-202004869 | Small_Intestine | SE_56834 | chr1:202002917-202004651 | VACO_400 | SE_57376 | chr1:202003233-202004124 | VACO_503 | SE_57376 | chr1:202004143-202004423 | VACO_503 | SE_57945 | chr1:202003251-202004112 | VACO_9m | SE_57945 | chr1:202004146-202004634 | VACO_9m | SE_65333 | chr1:202002930-202005541 | Pancreatic_islets | SE_67013 | chr1:202002752-202008344 | H2171 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I202033 | chr1 | 202002815 | 202007566 |
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Enhancer Sequence | TGTAATTGTC TTTCTCCCCC CACTAAAATG AACACTCCGT GAGGGCATGG CATTTTGCCT 60 GCTTTGCTCA CAATGTGTAT CCCACTGAAG ACATCCAATA AACAATTTAT CGAATAAATG 120 AATGCATCTA CCTGATACCT CATCAAGAAA TTGATGACCA CTAATTATCA TCTTTGAACC 180 TCTGATTGGT GACCTCTGGC AAGGCTGAGG ACCTTTAGCT CTAATCAATG GGCAAAAGGT 240 TGACCTCTTT GCTACTGATT GGCTTTTCCT TTTCATTATA CCCTTGGGCT GGATGGGGAA 300 GCTGTGTGAA TCAACGCTTC ATAAGCCTTC CTCTCTGAGA ACTAGGGCTT CCAAGGAATT 360 GGATATGAAA AGGCAGAGAG GAAGGAGGAG GATATGAGAT GCCAGACGGG GGAGGGTGGG 420 GGGGACAGGT CCCAGAAGAG GTCAGCTGGG ACCCAGGCAG GATGGCATTG TGGCTGCGGG 480 TGCCAGAGTC AGCCTGCCTG GGTTAAGGTC CTCAGTCAGC CTTGACTGCT GGGTAATCCG 540 TGGTAAGTAC CCACTGCTCC TGCCTCAGCT TCCCCACCTC TCACATGTGG TTGATCCTCA 600 CAGCCATCTC TTGGGGTTGT TCTGAAGATG AAATGAGATC ATCTATGTAA GAAGCTGGCA 660 CTTAAAAGCA CAGAGAGGGC ACCAAGGAAC GTATGGTCTG TCCTTATTTG GGGAATGGGG 720 GTGGAAGGCG CCCAGCAGGG CATGGGGCGT GGTATGGCAG AGCCAGGACT AAGGGTCTGT 780 AGCCTCCTAA ATCAGGGCTT TCTCCGCAGG ATTTCCCATG TTCTCACCAT CTACAGAGTC 840 ACTCCCCTCC ACCCTGCTGC CCCGTTCCAC CAAGTGGCCC TCACACTAGG TGGAGGAGCC 900 CTCACAGATC TCTTTCCTTC AGCCTGCCGT TCTTTCTGCA GCACCAGGGC CCTGGGACCA 960 GCTGGTGGTT TCCACCAGAG CAGCCTCGGG GTGAATTTAG TCAGGAATGT GCCCTCAGCT 1020 CAAGAGAACC CTCCCCAACC TTCCACTCCC CATACCCACC CCCGACCGCA GGTTCCCCAC 1080 CCACCCGTGG CCTGGCCAGC AGCAACCTCC ACTAGCTCGC TAGCTCAGTG ACGGTGACGT 1140 CAGCCCTGCA GTGCAGGCTG GGCTGGTTTA CCCGCAAGTT TCACCTCTCC CTGGGGAGAC 1200 TGGATTACCT CACCCTGGGA GCAGAGTGAA TGATTAACCA GCTTCATCCT GGAGGGCCTC 1260 AAAGGCCCGT CCTGGGGTGT AGGCCTACAG GGCAAGGGGC TGCATGGTCA CATACCCTAG 1320 TATGCGGGTT CACATACCCC AGCCGGGGCT GGGGTATGTG ACCGCCCCGT CCTTGGCCAC 1380 TGCCCTCTTA TCTGCATCAC TGCTCACAAG TGTCATAAAA ATTTGTCTAC AGCATATATA 1440 AATATACATA TGACGTGGAA GGCTTCCGAT GGCAAATAAC ATTTTCCATT TTGCCTAAGC 1500 TTGGGTGGCT TTTTATTCAT CTATTGTTGT TTTAAGTACA CATTTCCATC TAAACTTAGA 1560 TGTATGTTTA GGCTGGCCGC GGTGGCTCAT TGCCTGTAAT CCCAGTACCT TTTAGGGGGT 1620 TGAGGCGGGT GGATCATTTG AGGCCAGCAG TTCAAGACCA GCCTGGCCAA CATGATGAAA 1680 CCTCGTCTCT ACTAAAAAAT ACAAAAATTA GCTGGGTGTG GTGGCAGGCG TCTGTAATCT 1740 CAGCTACTCG GGAGGCTGAG GCAGGAGAAT CACTTGAACC TGGGAGGCGG AGGCTGCAGT 1800 GAGCTGAGAT TGCACCATTG CACTCCAGCC TGGGCAACAG AGTGACATTC TGTCTCAAAA 1860 ACAAAAACAA AAACAAAACA AAAAAAATAA ACTTAGATGT ATATTTAAAA ATTGCTTTTT 1920 ACCCCTGAAG GTCTCAGCAT CCTACCTGCT CTATTCATTA 1960
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