| Tag | Content |
|---|
EnhancerAtlas ID | HS052-00643 |
Organism | Homo sapiens |
Tissue/cell | Fibroblast_foreskin |
Coordinate | chr1:26221360-26223550 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:26222064-26222083 | CCGCCTCAAGGGGGCAGCA | + | 6.12 | | HNF1A | MA0046.2 | chr1:26222568-26222583 | AATTAATGAGTAACA | + | 6.33 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_03348 | chr1:26222021-26223614 | Brain_Angular_Gyrus | | SE_04754 | chr1:26221685-26228407 | Brain_Anterior_Caudate | | SE_05300 | chr1:26221344-26235071 | Brain_Cingulate_Gyrus | | SE_06612 | chr1:26221152-26230525 | Brain_Hippocampus_Middle | | SE_07163 | chr1:26221197-26235018 | Brain_Hippocampus_Middle_150 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I025888 | chr1 | 26215117 | 26223131 |
|
Enhancer Sequence | CAACAGGCTG GCTCCAATTT TAGAAATTCT ACCTCCAAAG GTCTGAGGGT CCTGAGTCTC 60
ATATTTTGAA AAAGTACCAT GTGATCCTGA TACCCAGCTG GTGTCTGGCC CATAGAGGTG 120
CCAGCAAGTG TTTGGTGACT GGGCTTAGAG GTACAGTACA TCTCTGGAAG GAGACACGGG 180
AGACAGCTAG GTGACCTGGG AGGGAGGGAG ATTCACTTTT ATTATACGTC TTTTTTTTTT 240
TTTTTTTTTT TGAGACACAG TATCGCTCTG TTGCCCAGAC TGGAGTGCGG TGGCGTGATC 300
TATGCTCACT GCAACCTCTA CCTCCCGGGT TCATACCATT CTCCTGCCTC AGCCTCCCGA 360
GTAGCTGGGA CTACAGGCAC CCGCCACCAC GCCCGGCTAA TCTTGTTTTT GTATTTTTAG 420
TAGAGACGGG GTTTCACCGT GTTAGCCAGG ATGGTCTCAA TTTCCTGACC TCGTGATCTG 480
CCCGCCTCGG TCTCCCAAAG TGCTGGGATT ACAGGCTATT ACACGTCCTT TTATACTGAC 540
TGGACTTTTG ATCTAAAAAA CAGTTTGGCT GACTTGGAGT GATGGAGTTA CTAGTCTCTG 600
TGTCAGGGAC TGCAAATGCT GGGCCTCCAG CAGGGGCAGG GCGGATCCAG CGAAAGACAG 660
AAGTGGGTGG GCCCAAGGGG ATGGAGAGCT GCAGAACACA AGTCCCGCCT CAAGGGGGCA 720
GCAACTGCCC AGAGTCCGCT GACGGCCGCT GGGTGGGACT GCAAGCCCAG GGTTGCCAGA 780
TCTGTCAGCT TTTTTCAAGA TAAGCTTGAA ATCAGATTTT CACATGGAAT TGTCAGCTAA 840
TTCAACAATT TAAAACACAG CATGGGCTGA ATGCAACATG CCTATGGTTC AACATTGGCT 900
GCAGGCCACC AGTTTGTGCG TTCGGATCCA GGAGGATTCC ATTAAGGATT GTGCACCTCA 960
GAGCCATCTG CAAAGCTGGT GCAGACCCTT CATTTGCTTC TAGAAAATCG GGTTTACTCC 1020
ACATGGGGTC CGCAAAGGAT GAGGACAAAG CCAGTGCCCT GAGGTAGACC GTGGGAGTCA 1080
CCCACCCACT CATCATTATT TAATCCAGCA CATTAACCTC CCACCACGAG CCAGGAGATC 1140
CAGTGGTGAA TGTGACAGGA GGAGTCCCTG TTTTCAGGGA CCCTGTGTTC TAGCTGGGGA 1200
GACACTTGAA TTAATGAGTA ACACTTGTGA TACATGAGGA GTTGCAGTAC AGCATGGGGG 1260
TTAAAAGTCT GGGTTTGAGT CCTGACTCTA CTGCTTGCTA GTTGTCATTT TAGGTAAATC 1320
CCCTAATCTA GGTCCAGTTG CCTTACTTCT CGCCTATGGA ATGGCCATGA TAACCTCATA 1380
GGGCTGTTCT GGGGATTCAC TGAGACAATG CAAATAATTA TTAGTTGCTG CTATTAAATA 1440
GAGAGCTGTG AGAGCAGGGA AGAGGGGAGG CTAGGCTTAG CATGGGGACT TCCCCATCCC 1500
AGTGAATACT GGGGCTTTCT GCCAGTGAGG GGAGCAGGAG GCCACAGGGA TTGGAAGCTC 1560
CAGGCCCAGG AGAGGCTCAG TCCTTTTCTG CTGAGATGGC TGCTATGAGG TAGCTGGCTC 1620
ATTTCCTGTC TGTTTTTTCT TCCTATGGAT CCAATTTCAG CAGCCTACTT GTCTCAGTAG 1680
GATATGGTGC CCAAGGACTG GGCAGGTACT GCTCTGCTCT TGGCCACGAT GGAAGCAGGC 1740
CAGGCCTTTC TAACTATGAA CCAGAGCCCT TCCATGAAGC TGCTGCATTT TGGAGCTCAT 1800
CAAACCCTAC AACTAAGTTT TAAAAATCTA AGTGCATGTA CGAAACAAGT CAGAAACCCT 1860
TTCCTACGCC CTTAAGTACA GAATACCAGC TTCTGCTGGC AGAGGCCTCA GCCACAGGGA 1920
CATTTTGGAC CTTCGTTTCA CCTGGGCAAA AAGGGAGGAG GCAAGTGTCA AGAGACTTGG 1980
CTCACCAGCA ATGTGTCTGG GTCCTTGGAG TTCAGCTCTG TGTCTATGAC ATGGTCTCTG 2040
ATCTCAGGTG GTCTGCAATC CAACCCTGTA GAGAATCAGT CTTGGATTTG GAAGGGAACT 2100
TCTAGGGCAT CTAAGTCCAA CCTCCATCCA AAGGGGGAAG CTTTTCTATA AGAAACTTGG 2160
CCTTGCCAGG CGCGGTGGCT CATGCCTGTA 2190
|
