EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-00482

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr1:27437660-27439910

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFIL3

MA0025.1

chr1:27437902-27437913

TTATGTAACCT

6.14

dbSUPER

Number of super-enhancer constituents: 15
ID	Coordinate	Tissue/cell

SE_01262	chr1:27436890-27439189	Adrenal_Gland
SE_03596	chr1:27438692-27439122	Brain_Angular_Gyrus
SE_04452	chr1:27438199-27439154	Brain_Anterior_Caudate
SE_08182	chr1:27438188-27439420	Brain_Inferior_Temporal_Lobe
SE_09350	chr1:27435013-27444745	CD14
SE_23485	chr1:27438185-27439162	Colon_Crypt_1
SE_24258	chr1:27438257-27439147	Colon_Crypt_2
SE_26354	chr1:27437355-27438921	Duodenum_Smooth_Muscle
SE_31553	chr1:27438123-27439183	Gastric
SE_37352	chr1:27436917-27439906	HSMMtube
SE_41510	chr1:27438072-27439357	Left_Ventricle
SE_42522	chr1:27436904-27439928	Lung
SE_50517	chr1:27438086-27439710	Sigmoid_Colon
SE_52500	chr1:27437798-27439362	Small_Intestine
SE_53642	chr1:27436974-27439788	Spleen

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I027110

chr1

27436571

27439977

Enhancer Sequence

GACAGCCTCT TAGCAGGTGC GTACTCAGCC GTGGGCTAAA CTCATTCCTG GCCTGAGGGG 60
ATTCATGGGT CCTCATGGTC TACCACATGG GCCCATGGAG TCGGCACAGA GGGGAAAGTC 120
CTCCTTTCTG GCCTGGTGCT ATTACCCCTG GAACTATAGA GAAACAGAGT AACACAGTGG 180
TAAGCACTTG GGCTTTGGAC TCAGACTACG GATTTGAACC TCAGCTATAT CATATATCAG 240
GCTTATGTAA CCTCTCCGTT CCTCAGTTTC CTCATCGCAA AAAAACTGGA ATATAACTGT 300
GTCAACCTCA TGGAGTTACT GTATAGATTA AATGAGGCAA CATAGGCCAG ACACAGTGGC 360
TCACGCCTGT AATCTCAGCA CTTTGGGAGG CCAAAGAGGG AGCATCGCTT GTGCCCGGGA 420
GCTTGAGACC AGCCCAGGCA ACATAATGAG ACCCCATATC TACAAAATAA ATAAATAAAT 480
AAATAAATAA ATTAGCTGGG TGTGATGGCC AGCACCTGCA GTCCCAGCTA CTTGGGAGGC 540
TAAGAGGGGA TGATCATTTG AGGAGTTTGA GGGTGCAGTG AGCTATGATT GTGCTACTGC 600
ACTCCTGAGT GACACTGTCT GTGTGACAGG AGACTCTGTC TCTAAATAAA TAAATAAAAA 660
TGAGGCAATA CACATTCAGA CAGGAAGCAC CCAATGAACA CCAGCAATCA CTACCACCGC 720
TGCCACTGCC TTTGGGAGAC ATGACCATGG GTCCACAAAT GGCTGGGTCT GTTACCTGCT 780
TGATGCAACC ATGCCCCAAG CTCCACAGCA GTGCTCACCT GAACCCCAAC ACCCAGATCC 840
CACTGGAGAG GGCTTTATCT TTGGCACTCA CTGGCTTCAC AGACATTAGT GAGTATGACT 900
CACTAATGTA AGTAATCCTG TAAGAAGCCT GGGAGGATGA CAGGCTGAGT ACTGCAATCC 960
CTGTGTCACA GATGGGGAAA CTCAGGCTCA TGTGGTAACC CTGGGCAAGA GCTAGTGCTA 1020
GAGGAAGCCA GGATGGAGGC CTGCCTGCTC AGGTCAGGCT ATTCTACCCA GCCCCATGAG 1080
GAGGCGTGGG AGGAACAGGA AGCTGAGGCT GCCAGCAGCT GAACACCACA GTCTGTCTCT 1140
ACTCTGAGGT GCTGCTTCCT GAAGGCTGGG GCTGCAGAGG AGGGAGTCAT GGCCTGGGAA 1200
TGCACATGTG CCCTTGAGCT TTCCTGTGTG TGCAGCTGCT CTGAGCGGGA CAGCTCAGGA 1260
GGGGGTGGGA GTGTTCTCAC AACACAACGT GAGCATGCAC ATGCACACAT CTGTTTCCCA 1320
AGGAAACCAG CTGGGAGGAA GGGCATGTGC AGGTGTATAT GGTGCTACCA CGTGCAGACC 1380
CTGGAGGAAA GCACTAATCC TCTGCCACTT TGCAGCTATC AAAGGTGAGG CTGGCTGGGC 1440
GCAGTGGCTC ATGCCTGTAA TCCCAGCACT TTGGGAGGCT GAGGTGGGCG GATCACCTGA 1500
GGTCAGGAGT TCGAGATTAG CCTGGCCAAC ATGGCGAAAC CCAGTCTCTA CTAAAAACAC 1560
AAAAATTAGC TGGGCATGGT GACACACGCC TGTAATCCCA GCTACTTGGG AGGCTGAGGC 1620
AGGAGAATTG CTTGAACCTG GGAGGCGGAG GTTGCAGTGA GCTGAGCTTG CGTCACTGCA 1680
CTCCTGTCTG GGAGACAGAG CAAGACTCCA TCTCAAAAAA AAAAAAAAAA AAAAAAGGTG 1740
AGGGCCACAG AGGTATAGCA TTTGCTTAAG GTCACACAGC AAGCAAGTGG CCAACTTCTT 1800
TTACTTATCA CCTTCTAGAT GTTTTGGAGA CAAGGCCCCT TTCCATAATC TCCGCCCAAA 1860
AACTGTGCAC AAACCGAATT CTAACTTAAG ATATAGCCAA CATGAGAGCT GAAAGGCCCC 1920
TCACAGATGA TATGGTCTGT GAAGAGGGAA CTGAGGCACA GAGAGTGTAA GTAATTTGCC 1980
CAAGCTCACA TCAAAATGCA AGAGAAGGGC CAGGCTTGTT GGCTTAGGTC TGTAATCTCA 2040
GCACTTTGGG AGGCCGAGGC AGGAGGATGG TTTGAGGCCA AGAGTTCAAG ACCAGCCTGG 2100
GCAACATGGT CAAACCCCAT CTCCACAAAA AATTTAAAAA ATTAGCCGGG TGTGGTGGTG 2160
CATGCCTGTA GTCCTAGCCA CTCGGAAGGC TGAGGCAGGA GGATCTCAGG CCCAGGTATT 2220
TGAGGCTGCA GTGAGTTATG ACCGTACCAG 2250