EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS051-00042

Organism

Homo sapiens

Tissue/cell

Fetal_thymus

Coordinate

chr1:2105640-2106190

Target genes

Number: 12
Name	Ensembl ID

RP11	ENSG00000233542
PRKCZ	ENSG00000067606
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RP4	ENSG00000238240
AL513477.1	ENSG00000178642
MORN1	ENSG00000116151
RER1	ENSG00000157916
PEX10	ENSG00000157911
PANK4	ENSG00000157881
TNFRSF14	ENSG00000157873

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr1:2105894-2105913	CGGTGCCCTCTGGTGGCCA	-	8.98
HEY2	MA0649.1	chr1:2105987-2105997	GACACGTGCC	+	6.02
Npas2	MA0626.1	chr1:2105987-2105997	GACACGTGCC	-	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002173

chr1

2104870

2106718

Enhancer Sequence

CCACACCTGT GGGTCAGCAG GAAAGAGAAC CTGTCCCCAT TCAGCTCCAA CTCCCTCCTG 60
CCCTGGCCAG CAGCACATGC TGGAGCCCCA GCATGTCCTT GACCGAGGCT GTACCGAGCT 120
GAAAGCACAG CCCCCACCCC CAAAACCCAC AGCCACCATC ATGGGCTCCT TCCCACCTGG 180
AGGCCCCGGG ACCTGCTCCT GGTCTGGAAT TCAGTGCTGT GGGGATGTGG GATCTGGGAA 240
CGCGGCTGTC TCCGCGGTGC CCTCTGGTGG CCAGCCTGCA GAGGCACCCG TGTACCTGCG 300
ATCTTGGGGC TGAGGAAGGG GAGCTGCTGG TTCACGTCCG ATCCTACGAC ACGTGCCAGC 360
GCATGTAACC AGGAGGCCCA GGGAGGACCC GGCGGGACTC CGGGTTATAG ATATTGCTGG 420
GCTGTAGGAA GGGAGGGGCT CCGGGGCCCC AAGGCTGAGC TCCCAAAGCT CTTGCTCAGA 480
GTCAGAGTCT GGGCGGCACT GGGCAAATGG CACACAACAC AGGCAAGTCC TCACCAGGCT 540
CCGCCCTTGC 550