EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS050-04088

Organism

Homo sapiens

Tissue/cell

Fetal_stomach

Coordinate

chr1:150600420-150601530

Target genes

Number: 26
Name	Ensembl ID

ANP32E	ENSG00000143401
MRPS21	ENSG00000187145
RPRD2	ENSG00000163125
TARS2	ENSG00000143374
ECM1	ENSG00000143369
LINC00568	ENSG00000228126
ADAMTSL4	ENSG00000143382
AL356356.1	ENSG00000225996
RP11	ENSG00000237781
C1orf138	ENSG00000203804
MCL1	ENSG00000143384
SNORA40	ENSG00000253047
ENSA	ENSG00000143420
GOLPH3L	ENSG00000143457
U6	ENSG00000206931
HORMAD1	ENSG00000143452
CTSS	ENSG00000163131
UBE2D3P3	ENSG00000224690
CTSK	ENSG00000143387
ARNT	ENSG00000143437
Y	ENSG00000212512
SETDB1	ENSG00000143379
CERS2	ENSG00000143418
ANXA9	ENSG00000143412
FAM63A	ENSG00000143409
PRUNE	ENSG00000143363

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL1	MA0477.1	chr1:150600500-150600511	AGTGACTCATG	+	6.14
MNX1	MA0707.1	chr1:150601285-150601295	TTTAATTACC	-	6.02
ONECUT1	MA0679.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.73
ONECUT2	MA0756.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.51
ONECUT3	MA0757.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.79

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_14726	chr1:150599729-150603822	CD4_Memory_Primary_7pool
SE_18894	chr1:150599212-150603232	CD4p_CD25-_Il17-_PMAstim_Th
SE_19754	chr1:150599600-150602962	CD4p_CD25-_Il17p_PMAstim_Th17
SE_64527	chr1:150594020-150603142	NHEK

Enhancer Sequence

GAGGATGAGT AGCAGGGTTC CCTAGGCTAT CCTACATGTC ACATGAGAAA TTAAAAAAAA 60
AATAGTTTGG GGCTGGGAGC AGTGACTCAT GCCTGTAATC CCAGCACTTT GGGAGGCTGA 120
GGCAGGTGCA TCACTTGAGC TCATGAATTC ACTACCCGCC TGGGCAATAT GTTGAAACCC 180
CGTCTCTACA ACAACAAAAA ATAGTTTGCT AAATGTTTCC TCCTTATTTT TTTCTTTCTT 240
TTTTAAAATT GCTACACGAC AAAGCAGTTC CTTCTTTATT CAAGGTCTAA GCCACCTGTT 300
AGGTCTCCCT GTGGAGGCGG CTAGCTATGT GGCCTTCTCC AAAGATCTCC ACCTGAGTAA 360
TGGCACAGCC TTGCTTCAAC ATTTCCACAA ATATTATGGT AGCAAGCTGA TAAACAGAGA 420
GGAAAATGAT ACTGTTTTTA ACCTCAGGAA AACAAAGATA CAGTAGGCTC ACTAGTATTT 480
ACCCACCAGT TTTCATCAAA AAAATCAATA CCTACCCTGG TGGTGCAGGG ACTCTCACTA 540
CTGTAGTCAA TCTCTTTTTT TTTTTTTTGT GGTCCCTGCT GCCCTTTAGT GACTTTTTGA 600
AAAGATATGA AGTCAACGTA TGACTCTTTT TAGTGGAATT ATATTCCTTT CTCTTGGAAA 660
TTACGCATAG ATATAACACC AAGTGTATTT AATGAGTACC TGAACCCAGT ACTAAATTTT 720
AAAAGTCAAA TACAAACCCC AATAAGGGGT TTATTTGGCG TTAGTGTTTC CATCACGGAA 780
TCGCAGGTGC ACTAAGTCCC TGCCTTGGAA GTCTAGGGGA AGAGAGAAGT GTCTTTCTCA 840
CGACCCTGTC GGCGTCTTTT CCAAGTTTAA TTACCATGAT TCTGTTTGGA ACTCTAGCCC 900
TCTTCAATAT TGCTGGGTCC TCACTGAAGG TGAGCAATAG ACCATCCTTA GCTACTAAAA 960
TAGGTCTCTT GAGAAAGTTG CCGCCTTAAA CTAGCCATTA TAATAACTAC ACTTCTCCCC 1020
TCCCCCAATA CTGGTTTTTT TTTAAACGTC TTTACCTCGA CCCCTATCTT TGCGGATTGA 1080
GGCTGCGGGC CCCAGCCCGG TTGCTGGGTC 1110