| Tag | Content |
|---|
EnhancerAtlas ID | HS049-00674 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr1:201416970-201418730 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:201417396-201417415 | AGGCCACCAGGGGGCAGCC | + | 7.45 | | RARA(var.2) | MA0730.1 | chr1:201418182-201418199 | AGACCTCTGGGTGACCC | - | 6.25 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_00341 | chr1:201417206-201418812 | Adipose_Nuclei | | SE_03836 | chr1:201416657-201418793 | Brain_Angular_Gyrus | | SE_04842 | chr1:201416275-201421120 | Brain_Cingulate_Gyrus | | SE_05817 | chr1:201416349-201421730 | Brain_Hippocampus_Middle | | SE_06742 | chr1:201416483-201421155 | Brain_Hippocampus_Middle_150 | | SE_07798 | chr1:201416177-201421169 | Brain_Inferior_Temporal_Lobe | | SE_25848 | chr1:201417458-201418504 | Duodenum_Smooth_Muscle | | SE_34751 | chr1:201416761-201418418 | HeLa | | SE_35910 | chr1:201416346-201418315 | HMEC | | SE_55901 | chr1:201416522-201419041 | u87 | | SE_63790 | chr1:201416926-201417441 | HSMM | | SE_63790 | chr1:201417457-201418685 | HSMM | | SE_64619 | chr1:201416494-201417728 | NHEK | | SE_65522 | chr1:201416824-201418584 | Pancreatic_islets | | SE_67648 | chr1:201416522-201419041 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I201447 | chr1 | 201416632 | 201418626 |
|
Enhancer Sequence | ACTGAGGCTT ATCAAGATAA ACATCTTGCA CCCAGCCAGC AAATGGGAGA GCCAGGATTC 60
AAACCCCATA CATGAAGCTT CCACGCCCAG GATGTTAGCA CTATTGCACA CTATTGCTTC 120
TTATTTCACA AATAACTCCC TGAGGCCCAG AGAGGTTGCT GAATCACCTA AGGTTCCACA 180
GGTGCTGGGG GCAGTGTGGG GGCTGATCCC AAGCCCTGGA TCCATGGACC CTCCCTTTCA 240
TGAACTGCCT GACCTGCCTG TGTTGTGCCA TCTCGCCTCT CATAATCTTT CTCTCCGCCC 300
CCACCCAGGG ACCCTGGGAA CAGTTTAGGG AGTGGGGAGC TGGGGTCAGA CGAGTCATCC 360
TGTGGGATGG AATCTGACTG CTCCTTAAGC AGCTCAGGCA GACATCTAGG TGGGTGAGTG 420
CAGGTTAGGC CACCAGGGGG CAGCCCCACC CTCCCCGCAC CCTACATCCG GCAGCTCCCA 480
GCACACACAG GGCGCGCCTC GACCGCCAGA GTGGTCCAAG AAAAGGCGAA AGGACAATGG 540
GGTAATTGAT GCAAATGCAC CATGAAAGAC AAATTGTTCA GATGAAGTGC ATTCCGGGCT 600
CCTGCCAAAC GCCCAGGGTG TGTGGAATTT CAAGGAAAAG CTGAGTACAT TTAGGCCGTC 660
TGGCTGGGCC ACTGTGCCCC CTGACCCAGC TTCCAGCCTG AGCCACAGCT CCCTTCCCTG 720
GAATGTTGCA GGCTTGGCCT GGGCTCCCAG CGGCTGACCC TGGCATGGGG GTGGGGGGGC 780
AGTGGGAAGG GACGGAGCAG GTGGTGTGAT GGGAGGACCC TGACCTTTAC TGCAAAAAGG 840
ACCCTGGCAC CCACGCTTTC AGACGGCCTT CGGGCCTCTC GAATAAATTC ACCACACATA 900
CTCCATCCCC ACTCCCAGAG CTGCTGTGAA TGCTGGCACT TCCTCTTACT CCCTGGGTGG 960
CCTCAGGTAA AGCCTTCCTT CTCTTTGAAC CTGTTTTCTC ATCTGTAAAA TAGGGGTAAT 1020
CATCTTTTGC ATTTATACCC TACAGGGTTG TGAGGATCAA ATGAGAAAGG TCAGGAAACT 1080
TCTGTTCCTT TCTATTCAAA GAAGGCCACT TCTCAAGCTC CACAAGAAGC CACCCAGAGC 1140
AGCCAATCTC CTGCCTCCCC CAGACTCCAG AAACCCAAAA CTTGCTACCC AGCCTCACCC 1200
CTGGCTCCCT GGAGACCTCT GGGTGACCCT GGCCCCAGCA CTGGCCCTGT AGAAAGACTC 1260
TCAGCCTCCC TCCCATCACA AGATCTGAAC TTCCGACCAC CCCCCAACGC AGAGAGGGTG 1320
GAGCAGGATC TGAAGCTGAG GCCTGCACAA GGGCCCCTTG TCCTGCTGGG CAGCCTGGCA 1380
CGATCTGTCC TGTCCCAAGG AGGCTCGCTG GGACTATTGT CTTTGTGTTG TGGCTTGGGG 1440
GAGGGGCAGA TCATGGTTCA TCAGGGCCAG GCCAGAGGGA CGAGGCTCAC ACTCCAGCCC 1500
ATCTCCTGGA GTGGCAGGTT TTGATACCTT CCTCCCACTC CACAATGGCC AGACATGTGC 1560
CAGGATTTGT TCTGGATCCT TCCAGGCTGC TGGGTCCCAT TGTTAATCAA GGTGCCTCCG 1620
CACCCTGCTT CCTGCCATTG CCTGCCTGAA AAAGCTCAGT TTCCATCTTC TATCTTGATA 1680
ATCCCCATCC CATCCTTGTT CCTTCCCTGT CTTTATTATA TGAATTATTT ACTAAATCAT 1740
GCAATGCACC TAACAGAGTA 1760
|
