| Tag | Content |
|---|
EnhancerAtlas ID | HS049-00228 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr1:32421600-32422300 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:32421832-32421851 | CAGTTCCCTCTGCTGGCCC | - | 6.36 | | IRF1 | MA0050.2 | chr1:32422228-32422249 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 |
|
| | Number of super-enhancer constituents: 48 | ID | Coordinate | Tissue/cell |
| SE_00185 | chr1:32419404-32424304 | Adipose_Nuclei | | SE_01455 | chr1:32421522-32422412 | Adrenal_Gland | | SE_03010 | chr1:32421730-32422365 | Bladder | | SE_09496 | chr1:32418058-32428385 | CD14 | | SE_11611 | chr1:32420063-32422813 | CD20 | | SE_12303 | chr1:32421408-32422344 | CD3 | | SE_13610 | chr1:32419779-32422620 | CD34_Primary_RO01536 | | SE_14567 | chr1:32419441-32422703 | CD4_Memory_Primary_7pool | | SE_18176 | chr1:32420050-32422535 | CD4p_CD25-_CD45ROp_Memory | | SE_18474 | chr1:32419953-32422691 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19618 | chr1:32421430-32422444 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20913 | chr1:32419675-32422740 | CD8_Memory_7pool | | SE_22706 | chr1:32421400-32422397 | CD8_primiary | | SE_24317 | chr1:32421658-32422218 | Colon_Crypt_2 | | SE_25246 | chr1:32421733-32422249 | Colon_Crypt_3 | | SE_25437 | chr1:32421516-32422360 | DND41 | | SE_26248 | chr1:32419683-32422741 | Duodenum_Smooth_Muscle | | SE_27326 | chr1:32419664-32422845 | Esophagus | | SE_28018 | chr1:32419790-32422410 | Fetal_Intestine | | SE_29138 | chr1:32419770-32422630 | Fetal_Intestine_Large | | SE_30289 | chr1:32421416-32422384 | Fetal_Muscle | | SE_31027 | chr1:32421467-32422341 | Fetal_Thymus | | SE_31788 | chr1:32421397-32422862 | Gastric | | SE_32591 | chr1:32421593-32424967 | GM12878 | | SE_34572 | chr1:32421591-32422408 | HCT-116 | | SE_34675 | chr1:32416735-32424252 | HeLa | | SE_37823 | chr1:32419700-32422879 | HSMMtube | | SE_38810 | chr1:32419525-32422434 | HUVEC | | SE_39284 | chr1:32421570-32422477 | IMR90 | | SE_39509 | chr1:32421570-32422231 | Jurkat | | SE_39960 | chr1:32421512-32422615 | K562 | | SE_41137 | chr1:32418170-32422571 | Left_Ventricle | | SE_42547 | chr1:32419802-32422957 | Lung | | SE_45230 | chr1:32419766-32422360 | NHLF | | SE_46136 | chr1:32419432-32422701 | Osteoblasts | | SE_47391 | chr1:32419677-32422469 | Panc1 | | SE_47857 | chr1:32421787-32422240 | Pancreas | | SE_49021 | chr1:32421571-32422333 | Right_Atrium | | SE_50456 | chr1:32421482-32422352 | Sigmoid_Colon | | SE_51637 | chr1:32419513-32422881 | Skeletal_Muscle | | SE_52642 | chr1:32421535-32422413 | Small_Intestine | | SE_53748 | chr1:32421433-32422422 | Spleen | | SE_55181 | chr1:32421645-32422277 | Thymus | | SE_56686 | chr1:32419684-32422618 | u87 | | SE_59623 | chr1:32331606-32430327 | Ly4 | | SE_62431 | chr1:32376082-32428121 | Tonsil | | SE_64663 | chr1:32419773-32422373 | NHEK | | SE_66311 | chr1:32421570-32422231 | Jurkat |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I031951 | chr1 | 32417141 | 32426201 |
|
Enhancer Sequence | CTCTCTGAAG CTGGGGCCCA ATTGTCCTTC TTCCTTCAAT ATCTAATGAC TGTTTCCCAG 60
CTATCAGAAA GGAATCCAAC TTCCCCTCCC CCAGAGCTGT GAAACTGAGT AGCAAAGCTT 120
GCTCAAGCTC CTGAGTCATT CAGCAAAACC AGCCCAAGAT AATCAGTGGA TCAAGGAAAC 180
TAGATGCAGA GTGGGGAAAA CCCAGCCGCA AAGCTGGGGC CTTCTCGCAG GGCAGTTCCC 240
TCTGCTGGCC CCTCTGGTGA GCTTTCACTT CAGGTTCACA AACAAGACAG CATCTTCCCA 300
GGCCCTCCTG AACCCAGAAT AAGGCCTTAG CTACTCCTGG GTCTCTCAAC AGCAGCCAGG 360
CCTTTCTCTG GAATCTTGTT TGACACAAAC TTTTTGCCTT TGGACAAACT CTCTCCTTCC 420
CTCCGTATCC CAGGCCTCAG GAGAGTCGAA ACCCTGACTC CCATTCTCAC TGTCCACTCA 480
TTTCTCAGTC CCTGTCATTT GACTTCTGCC CAGCCACTGA ACTGTCTGTC ATCACACTCA 540
GTGATGATCT TTTCATCACC AAATCCAAAG ACTTTTTCCA GGCCTTTCCT ACTTGCCTCT 600
TCTAAACAGT CAGCGCTGTC GACCACTTTC TTTCTTTCTT TTTTTTTTTT TCTGAGACGG 660
AGTTTCACTC TTGTTGTCCA GGCTGGAGTG TACTGGCGTG 700
|
