Tag | Content |
---|
EnhancerAtlas ID | HS049-00095 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr1:17238870-17242490 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ESR2 | MA0258.2 | chr1:17239166-17239181 | GGGTCACACAGACCT | + | 6.33 | Hnf4a | MA0114.3 | chr1:17239982-17239998 | GAGGTCCAAGTCCAGT | + | 6.07 | KLF5 | MA0599.1 | chr1:17240495-17240505 | GCCCCGCCCC | + | 6.02 |
|
| Number of super-enhancer constituents: 69 | ID | Coordinate | Tissue/cell |
SE_01476 | chr1:17239966-17242069 | Adrenal_Gland | SE_02875 | chr1:17240618-17241434 | Astrocytes | SE_03430 | chr1:17238100-17239778 | Brain_Angular_Gyrus | SE_03430 | chr1:17239783-17240499 | Brain_Angular_Gyrus | SE_03430 | chr1:17240731-17242488 | Brain_Angular_Gyrus | SE_04111 | chr1:17237927-17240527 | Brain_Anterior_Caudate | SE_04111 | chr1:17240628-17242448 | Brain_Anterior_Caudate | SE_05172 | chr1:17237770-17246094 | Brain_Cingulate_Gyrus | SE_06210 | chr1:17237645-17245771 | Brain_Hippocampus_Middle | SE_07232 | chr1:17238080-17242647 | Brain_Hippocampus_Middle_150 | SE_08076 | chr1:17237896-17246252 | Brain_Inferior_Temporal_Lobe | SE_08889 | chr1:17238819-17239676 | Brain_Mid_Frontal_Lobe | SE_08889 | chr1:17239947-17240454 | Brain_Mid_Frontal_Lobe | SE_08889 | chr1:17240789-17242026 | Brain_Mid_Frontal_Lobe | SE_10448 | chr1:17239853-17240476 | CD19_Primary | SE_11024 | chr1:17237883-17245307 | CD20 | SE_12131 | chr1:17240859-17241779 | CD3 | SE_13570 | chr1:17240617-17241484 | CD34_Primary_RO01536 | SE_14531 | chr1:17239563-17241985 | CD4_Memory_Primary_7pool | SE_15440 | chr1:17239829-17241939 | CD4_Memory_Primary_8pool | SE_15839 | chr1:17240568-17241687 | CD4_Naive_Primary_7pool | SE_16401 | chr1:17239578-17241745 | CD4_Naive_Primary_8pool | SE_17223 | chr1:17239936-17240632 | CD4p_CD225int_CD127p_Tmem | SE_17223 | chr1:17240641-17241519 | CD4p_CD225int_CD127p_Tmem | SE_17702 | chr1:17238954-17242280 | CD4p_CD25-_CD45RAp_Naive | SE_18224 | chr1:17239283-17242338 | CD4p_CD25-_CD45ROp_Memory | SE_19865 | chr1:17239824-17242024 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20182 | chr1:17239788-17241910 | CD56 | SE_20877 | chr1:17239477-17241855 | CD8_Memory_7pool | SE_21501 | chr1:17239632-17241900 | CD8_Naive_7pool | SE_22012 | chr1:17239593-17241877 | CD8_Naive_8pool | SE_22656 | chr1:17239909-17240454 | CD8_primiary | SE_22656 | chr1:17240604-17241913 | CD8_primiary | SE_23911 | chr1:17238846-17239391 | Colon_Crypt_2 | SE_23911 | chr1:17239885-17240478 | Colon_Crypt_2 | SE_23911 | chr1:17240479-17241564 | Colon_Crypt_2 | SE_25305 | chr1:17239947-17241454 | Colon_Crypt_3 | SE_27153 | chr1:17239835-17242028 | Esophagus | SE_28353 | chr1:17239867-17240494 | Fetal_Intestine | SE_28353 | chr1:17240610-17241704 | Fetal_Intestine | SE_29508 | chr1:17239703-17240542 | Fetal_Intestine_Large | SE_29649 | chr1:17238840-17240515 | Fetal_Muscle | SE_29649 | chr1:17240656-17242112 | Fetal_Muscle | SE_31118 | chr1:17238627-17240491 | Fetal_Thymus | SE_31118 | chr1:17240712-17241947 | Fetal_Thymus | SE_31881 | chr1:17239819-17242135 | Gastric | SE_33013 | chr1:17239950-17240437 | H1 | SE_33013 | chr1:17240620-17241403 | H1 | SE_33540 | chr1:17239257-17245174 | H2171 | SE_35172 | chr1:17239807-17241711 | HeLa | SE_42843 | chr1:17239864-17243201 | Lung | SE_45444 | chr1:17239949-17240367 | NHLF | SE_47744 | chr1:17239961-17240545 | Pancreas | SE_47744 | chr1:17240549-17242006 | Pancreas | SE_51608 | chr1:17238813-17242145 | Skeletal_Muscle | SE_53155 | chr1:17238762-17240528 | Small_Intestine | SE_53155 | chr1:17240572-17241791 | Small_Intestine | SE_53544 | chr1:17238838-17241941 | Spleen | SE_54964 | chr1:17238808-17242458 | Stomach_Smooth_Muscle | SE_55554 | chr1:17240073-17240473 | Thymus | SE_55554 | chr1:17240575-17241458 | Thymus | SE_61917 | chr1:17221528-17256732 | Toledo | SE_63124 | chr1:17215209-17241689 | Tonsil | SE_63250 | chr1:17222916-17254487 | GLC16 | SE_63321 | chr1:17222804-17249569 | NCI-H82 | SE_65449 | chr1:17237943-17242529 | Pancreatic_islets | SE_67642 | chr1:17239816-17240437 | u87 | SE_67642 | chr1:17240556-17241577 | u87 | SE_68996 | chr1:17239943-17241712 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 17239897 | 17240265 | chr1 | 17238871 | 17239124 | chr1 | 17239430 | 17239585 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I016912 | chr1 | 17238896 | 17241927 |
|
Enhancer Sequence | CTGCTTCACG GGAGTGTTCA GAGGGGACTG TAGACAGAGC GGGAACATAG AAGAGGAAGT 60 AGGCGGCAGT GTGGTTCACA GCCAGCGCAG GCTGCCTGCA GGGTGCAGGT ACTGTCACCA 120 AGGGAGACCC AAGGTGCCCT GGAGGGAGTG GCAAGGACAC AGGCCTGAGC CCAGCCCTGG 180 TGATATGAAC ACTGGAGTGG GCTTCACAGG GACAGGCAGC ATCAGAACTG GACTAGTGAG 240 GTCATGAGCC CACCAGGGCC TGGGTAGGGA CATAGCAAGT CTGGGGACTC CAGACAGGGT 300 CACACAGACC TGGGCCATGC TGGGCATCCA GGGACTGGCT GTGCATACTG GCAGATGTCA 360 GTCAGCCCTC CTGCAGTTGG GCCAGGGACA CCTCAGGGAA ACTGTGACCT TCCTTCCAAT 420 CTTGGTAACA TCACCCTTCC ACCCCAAATC CCAGGGAATG GCCCGAATCT CTCCTGACAA 480 ACAGCTCTCA GCCCTGGTCC AGGCCACAGT CTTGCTTGCA CCGGGCCGGG TTTCAGAGCC 540 CGAAGGGCAC ACTGGCAGCC TTTAGTGCAG TGTTTCAGAT GTCACAGACA GGTTCCTCTT 600 TGACGAAGAT GGAACTTCCA CTGCTTCCCT CCTACCACGC AGGAAACACA GAAGCAACCA 660 TCAGCCGAGG GCCTGCTGGC CGTTCTCTCT GGGTACTGTG TTTGGAAAAA GCACAAAATC 720 ATTAACTTAA ACATGCTTTT TCAAACCAAA CACATCCCTC TCTTAGCCCT GGAGATTCAG 780 AGCTGCCTCT CCCTTTGAAA ATGAATGATC TCGCCCGGGT GCAGTGGCTC ACGCCTGTAC 840 TCCCAGTACT TTGGGAAGCT GAGGCGGGTG GATCGCGAGG TCAGCAGTTT GAGACCAGCC 900 TGGCCAATAT GGTGAAACCC CGTCTCTACT GAAAATACAA AAATTAGCCG AGCGTGGCGG 960 CGGGCGCCTG TAGTCCAAGC TACTCAGGAG GCTGGGGCAG AGGTTGCGTT TAGCCAAGAT 1020 CATGCCACTG CACTCCAGCC TGGGCAATAG AGCAAGACTC CCTCAAAAAA AAAAAAAAGC 1080 ATGATTTCAT CCAATGCCTT CAATAACAGA AGGAGGTCCA AGTCCAGTGA GAGGGTGGAA 1140 CGAACATACT GTCACAGTGG AAAGGACACG AGACAGGCGC GCCACCGGGT TGAGTCTCGC 1200 GAACAAACTG AGGCCAGAGT GCCTTCCCCA GGGCTGCACG TCAGTCAGGA AAAAAAAAAG 1260 CATTCTCTCC GACAGGTCAA ATCACCGAAG CCTCGGGATC GTCGCTGGGG GCTGTGACGG 1320 GGCTGGCATG AAACGTCCCT CTGTCTGGCT GGGCGATGGG TCAGTGCTCA GGAGTTTCAG 1380 GCCTTTAAGG CCCGGCCAGA CCGCAGGGGG ACTCTGCAGC CGGGTCGGGG TTTCGATCCT 1440 GCGCTGCGGC CTTGCAACTG CGAGGACTTG GGGGTCGTGC TTCGTTCGCC TGGTATCCTC 1500 GTTCGTGCGT GTAGGAGGCG CCTGGCTTGC CGGGCGGTGC CAGGCGGCAA GAGGGAGGGC 1560 GCACGGAGCG TGTCCGCCCA GGGCGGCCCC TGTAAGCGCT GCAGAAGCGC TGCTCCCGGC 1620 GCCCGGCCCC GCCCCAGCCT CCGCCCCACT ACCGCGCAGC GCAGGCTCCG CCCCCAGTTT 1680 TCCCCGCCCC GTGGCGGGGA CGCCCCGCCC GGTCCGGCCC GCTCGGCCTC GGCAGCAGCG 1740 GCTGCGGCGA AGGCGCGCGA AGGTAGGTGG CCGGGGGCGC GCGCGTGCGC GGGGGCGGGA 1800 CGGACGCGCT CCCGGCGGAG GAGGCCGCGC GCCTGGGGGC GGGCTGGAGC CACGTACCGG 1860 GGCTGGGGGC GCTGTGTGTT CCGCGACTGC CGCGGCCCGG CACCGGAGGC CAGGAGAGCG 1920 TTCCCAACAG GCTCCGCGGA TGCCCCGCCG CGTCCTGCCG CCCATCCTGC CCGGATTGTC 1980 GCGGGCCGGG GGCACGACAG GAGACTGGGG CCTGCAGGGC GCAGCCGTCC CTCCGCCGGC 2040 CGGGGTCCCC TCGCTCCGCG GGCGGCCGTG GGAGGCCCTC GCGACGGCCT CTGCCCCCCG 2100 CAGATGCCCT CTGCAGCTCC TGCGTGCGGG CCCCGCCCTG CACTGCCCTC CTCGTGTGGG 2160 ATCCGGTTTC GTCTTCATTG CAGCCCTGCC GAGTCGGAAG CATCTCCATT GTGCGGATGG 2220 GGAAACTGAG GCCCAGAGCG CATAGTTGGG CTGGCCACGG AGGCAGGGCC GCCGGATGCT 2280 GTGCGGGGAT GGGGCCCTGC ACCCCTTGCG CCTCTCACCA TGCGGCCTCA GGCCTCTGTG 2340 CCCGGCAGCG TCTCTGGAGT GGGCATTTTG AACGAGCTCC CTCCTGATTT TCACACAGAC 2400 TTAAGCCTGA CGACCATGCT GGGGCGGATG TCTGCCCCTC TGGTGACCAG GTCACAGCTC 2460 CCTTGGGAAG ACGATTGACT GGGGAATGGG GACCCTGGGG AGGAGGACTT CAGGGTGCCA 2520 TCTGTCTGTT TACGCCAGAA AACAGAGATT TCTGTTTTCT TTCGCTGGGC TCACAGCAGG 2580 TGCTTAATAA ACAGATCTTG TGGCGGGAGC AGACGACAGC GAGGTTCAGG CAAGACTCCA 2640 GGAGTCAACC CCTGGATCTC GGAGGCTCCC CACCCGCGCA CATTTCCCTG ACTTAACCCT 2700 CCCCTCCCCA AGTCTTTCAG CCCTTTCCAC CCAAGTGGCC CCTGTGGGGG TCACTGCCTG 2760 GTTTTCACCC TGATCTTCTG GGATGCGGCA GATGCTGGCT GGATATGTGT TCGCTGGTGT 2820 CCTTCCGTGA TCCCCGTCTG TGGCTGACAC CATCTGTGGC CCAACATGAC CCCAGCCAGA 2880 GCCAAGGGGA ATCATTTCTT TTTCCATTTA ACATCCTATG TTATTACTTG GCTCTTAGCA 2940 TTCATTAATT CATTCAGCAG CTCTTCATGG AGCTTTGGCC TTAGCCCATG CACTGTGGAA 3000 GTGACAGTGA GCTAAGCCAA CCTGGCACTT TGGGAGGCTG AGGTGGGAGG ACCGCTTGAG 3060 CCCAGGAGTT GGAGACTAGC CTGGGCAACA TCTCATCTCT ACAACAAGTA AAAAATTAGC 3120 CAGACGTGGT GGCACGCACC TGTGGTCCCA GCTACTCAGG AGGCTGAGGT GGGAGGATCC 3180 CTTAAGCCCA GGAGGTCAAC GCTGCAGTGA GCCATGATTT TGCCACTGCA CTCCAGCCTG 3240 GAAAACAGAG CAAGACCTTG TCTCAAAGAA AAAAAAAAAA AAGGAGGAGA CAGACAACAT 3300 ACATGTTGGA GAAAATGGAA CAGCCACTGG AGGGACCTCT TTAGCTGAGA GTCGGGGTAG 3360 CTCCCTCAGA AAGTGATATT TTTGAGCCAA AATCTGGCCG ACAAGCGGGA GTCAGCTGTG 3420 CAAAAGAAGG GGGAAGTGCG TCCCAGGCAG AGAAAGTGGC AGTGCAAAGG CCCAGAGGTG 3480 GGTGCCTGCC TGGTGTTTGA GGAATCAAGA AGGCCATGAG CAGCCAGGTG TGGTGGCTCA 3540 TGCCTGTAAT TCCAGCACTT TGGGAGGCTA AGGTGGGTGG ATCACTTGAG GTCAGGAGTT 3600 TAAGACCAGC CTGGCCAATA 3620
|