| Tag | Content |
|---|
EnhancerAtlas ID | HS049-00060 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr1:11967290-11970220 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nkx3-2 | MA0122.3 | chr1:11968331-11968344 | TTTAAGTGTTTTA | - | 6.33 | | ZNF143 | MA0088.2 | chr1:11967995-11968011 | TACCCACAATGCATTG | + | 9.63 | | ZNF143 | MA0088.2 | chr1:11970183-11970199 | CAATGCATTGTGGGTA | - | 9.63 | | Zfx | MA0146.2 | chr1:11969285-11969299 | GAGGCCGAGGCGGG | - | 6.01 |
|
| | Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
| SE_04401 | chr1:11967802-11970392 | Brain_Anterior_Caudate | | SE_05426 | chr1:11967459-11970702 | Brain_Cingulate_Gyrus | | SE_06308 | chr1:11966827-11970789 | Brain_Hippocampus_Middle | | SE_07453 | chr1:11967402-11970810 | Brain_Hippocampus_Middle_150 | | SE_08423 | chr1:11967438-11970628 | Brain_Inferior_Temporal_Lobe | | SE_10739 | chr1:11967490-11970531 | CD19_Primary | | SE_13010 | chr1:11967686-11969397 | CD34_Primary_RO01480 | | SE_13010 | chr1:11969509-11970356 | CD34_Primary_RO01480 | | SE_13630 | chr1:11967645-11970731 | CD34_Primary_RO01536 | | SE_14236 | chr1:11967710-11969205 | CD34_Primary_RO01549 | | SE_14236 | chr1:11969377-11970343 | CD34_Primary_RO01549 | | SE_14675 | chr1:11967367-11971255 | CD4_Memory_Primary_7pool | | SE_16078 | chr1:11967699-11970381 | CD4_Naive_Primary_7pool | | SE_16518 | chr1:11967714-11970388 | CD4_Naive_Primary_8pool | | SE_21206 | chr1:11967365-11970416 | CD8_Memory_7pool | | SE_21842 | chr1:11967413-11970668 | CD8_Naive_7pool | | SE_22216 | chr1:11967346-11970790 | CD8_Naive_8pool | | SE_34570 | chr1:11966817-11970548 | HCT-116 | | SE_40308 | chr1:11967553-11971272 | K562 | | SE_54351 | chr1:11967622-11970499 | Spleen | | SE_66899 | chr1:11967081-11970418 | H2171 | | SE_67244 | chr1:11967631-11970544 | MM1S | | SE_67657 | chr1:11967812-11970390 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 11968510 | 11969143 | | chr1 | 11967830 | 11968200 |
|
Enhancer Sequence | TTCTCTAATC TCTTTCATAG GCTCCTGCAC TGTCCCCTCC TTTTATGCCA CCATCCCCCA 60
GGGACCTTCC TTGGCCTTTT CTCTCCTCAT TTCACAGCCT TTCCCAGGCC TTCCCCTGCT 120
CAGCCAGTAA TCTGTCTCCC AAACTCCTCA CTCTCCATAT TTCAGGCACA ACAGTTGCCA 180
ACAGAGGTTC TCAATGTGGC CTCCATCAGA ATCACACGGA GGATGAGTTC AGACTCAGGG 240
GGCTGGGCCC AATCCCCAGG CCTGCAGTAG GTCTGGAGTG GCTAGAAGTG TAAGAATTTT 300
TTTTTGGAGA CACGCTCTCG TTATGTTGCC CAGGCTGGTC TTGAACCCCT AGTTCAGGCG 360
ATCAGCCTGC CTCAGCCACC CAAAGTGCTG GGATTACAAG GGTGAGCCAC GGAGTCCAGC 420
CAAGATAATT TTTTTTTTAC TTTTTTTTTT AAGTTCAAAA AAATTCTTTA CTTATTAGGC 480
TAATTGTGCA ATTAAAAAAA AAAAAAAATT GCAAAAACCG CAATTACTTT TGCACCGATC 540
TAATAGCTCG CCCACTGTAA GTAAAGCAGG TAAAGTCAGC CTTTTTCTTC TGGGACCAGA 600
CTCTGCTCTG CCCCGCGGTG GTGGCCTCAG GCGCAGCGCT AAAACGCATG AACCATTTAA 660
GGTATTTCCT GAAACTGGAG CGTGATTGGT GAGACTTTAT TTGCATACCC ACAATGCATT 720
GCGCACTAAA TAATGTTCGT CTTTAAAATT ATTTCCCCTT TTTCCTTCAA CATATCTTTC 780
TCGGAACCGA GATTGCTGTC CCAGAATTGT CTGAAGAAAA AGGCTGAAGT CAATAGCTCT 840
TTTGGGCCGA AGGAAAGTTA CCATTACCCG TTTAGGAGTA GCCGTTACCT GAGAACTGTA 900
GTGTCGACGA CTGATGTTAT ACTCTGGTTT CTCTTCAAAT CGTATAAATC TTTCGCCTTT 960
TACTAAAGAT TTCCGTGGAG AGAAACGAGT GTGAGTCTGA AACCAATTTT TTGAGGCCTT 1020
GCGTTTCTTA GCAGGGCTTA TTTTAAGTGT TTTAAAAACA GATGCGATTC CGTTAAATCG 1080
CGTGTGGAGC TATGTAAAGT GTATTATAGA ACAAATGCGA GTTACGGTTT TTCAGCTTTT 1140
CGCTTTGTTA AGGTATGTGA TATCAATTGT ATTGCATTTC TGAGCAGTTA TAATATTAAG 1200
ATGTTGGGGT GGCTTACTGC TTTTGACCAA GAAGTAGGGT TTGTTGGTTG ATTACACCAG 1260
TGGTTTTTAA CCCCAGCCAC TGAGTGATGG AGGGTTACCG ACTCACAAGC GAGCATTAAC 1320
GCCTGAGGTC CGCCTGCTGT CAGGGCAGCA AGGCATCAGA TTCTCCTAGG AGCGGGAACC 1380
CTATTGTGAA CTGCGTATAC GAGGTATCTA GGTGCGTGCT CCTTTTAAGA ATCTAATGGC 1440
TGATGACGAG GGGCACAGTT TCAACCTGGA ACTGTCCACA CCCCCTACCC ACCTTCCCCC 1500
GCCCTTGGAA AAACTGCCTT CCATGAACTG GGTCCCTTGT GCCAGAAAGG TTGGGGACCG 1560
CTGGACTATC CGATCAAATG AAGCAGGGAC TCGGGGCGAG CTCCCCCGCT GCTCCCGCCG 1620
GCTTCTCCGT GTAGAATCGA AGAAGGCAGT CCCAAGGGCT CTTCTGCCCC GTATCCCCGC 1680
CTGAGGAGCG TGCCAGGCGC GCAGCTAGTC CTCCCCCGAC CCAACCGGTT TGATGAAACG 1740
CAAGAGAAAG TGAATTTTCC AGCCACTCCC ATTGGCCAGA ATTCGTCTCA GCCGCAAGGG 1800
AGGCTGGGAA GTGCAGTCAT GCCTTCAGGT AGCCGTGAGC CCTGCTAGCG ATAGGAGATT 1860
CTAGAGAGAG GTTGAGTACT GGGGAGGAAA AACTAGCAGG GTCTGTCCCA GTAAAGGAGG 1920
GAGGAAATCC ATCGCAAAAA ATCCTGACCC CCAGGCCGGG CGCGGTGGCT CACGCCTGTA 1980
ATCCCAGCAC TTTGGGAGGC CGAGGCGGGC GGATCACCTG CGGATCACCT GAGGTCAGGA 2040
GTTCGAGACT GGCCTGGCCA ACATGGAGAA ACCCCGTCTC TACTAAAAAT ACAAAAATTA 2100
GCCGGGCAGG AGGGCGCATG CCTGTAATCA CAGCCACTCG GGAGGCTGAG GCAGGAGAAT 2160
CGCTTGAACC TGGAAGGCGG AGGTTGCAGT GAACCGAGAT CGCGCCACTG CACTCGATCC 2220
TGAGCGACAG AGCGAGACTC TGTCTCAAAA AAAAAAAAAA AAAAAAAAAA AAATCTACCC 2280
CGGGCTCAGG CCCTGAAGCA GCCGCCCACA GCCCAGCCCC GCCGTGCCCC GCCGTGCCCC 2340
GCCGTGCCCC GCCGTGCCCC GCCATGCGAC TCAAAGCCCC ATTCAAGCTA CGTAGGAGGG 2400
TAAATTGTCC TTTTCCCCCA AGGCCAGCTG CTCCTCCAGA AGCCAGCTCT GGTCCTTCAG 2460
ACTCAAATAC TAGGGAACAA TGTTTTCTCT GAGTTTTGAG TGTGTTTCTT GTTTCAGAGT 2520
AAATACGAAC CGTCGTAATG GCTAAGGGCA TCTACTTTTA AAACGCTCAA ATAAGCCTTG 2580
CTAAAAAATG CAAGACCTCT AAAAAATTGG TTTAAAACTC AGAATTATTC CTCTCCACGG 2640
AAATCTTTAG TAAAAGGCGA AAGATTTATG CGATATGAAG AGAAACTAGA GTAAGAACTT 2700
CGATGAGTGG CACTCAGTTC TCAGGTAATG GCTACTCCCA ACAGGCTAAT GGTAAATTTC 2760
TTTCTGCCCA AAAGAGCTAT TGACTTCTGC CTTTTTCTTC AGACAATTCT GGAACAGCAA 2820
TCTCAGTTTC AGGAAAGATA GATTGAAGGA AAAAGGGGAC TAGTAATTTT AAAGACGAAA 2880
ATTATTTGGT GCACAATGCA TTGTGGGTAT GCAAATAAAG TCTCAGCAAT 2930
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