EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS046-02122

Organism

Homo sapiens

Tissue/cell

Fetal_muscle_leg

Coordinate

chr1:156130820-156131000

Target genes

Number: 20
Name	Ensembl ID

SCARNA4	ENSG00000252808
ARHGEF2	ENSG00000116584
RP11	ENSG00000241471
RAB25	ENSG00000132698
AL355388.1	ENSG00000222611
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SEMA4A	ENSG00000196189
SNORA26	ENSG00000252236
SLC25A44	ENSG00000160785
PMF1	ENSG00000160783
BGLAP	ENSG00000242252
PAQR6	ENSG00000160781
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
VHLL	ENSG00000189030
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
RHBG	ENSG00000132677

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:156130836-156130847	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:156130837-156130847	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr1:156130835-156130850	GGGGGGCGGGGCTAA	-	6.85
SP2	MA0516.2	chr1:156130834-156130851	CGGGGGGCGGGGCTAAC	-	6.88
SP4	MA0685.1	chr1:156130833-156130850	GCGGGGGGCGGGGCTAA	-	6.47

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_04119	chr1:156129914-156130901	Brain_Anterior_Caudate
SE_05125	chr1:156129057-156130951	Brain_Cingulate_Gyrus
SE_05929	chr1:156129458-156131995	Brain_Hippocampus_Middle
SE_07183	chr1:156130014-156130982	Brain_Hippocampus_Middle_150
SE_08091	chr1:156129841-156132079	Brain_Inferior_Temporal_Lobe
SE_42123	chr1:156129614-156130971	Lung
SE_43593	chr1:156115294-156133355	MM1S
SE_65290	chr1:156129865-156132879	Pancreatic_islets
SE_67276	chr1:156115294-156133355	MM1S

Enhancer Sequence

GTCCGCGGCC TGGGCGGGGG GCGGGGCTAA CTGGAGGAGA ACCAATAGGG AGATGGCAGG 60
GGCAGGACTG AGTGGTGGGC CCCCAGTGAG AGCGGGGGAG CGGGGCGGGG AACAAGCGGG 120
CCTGGCGGGG TGGGGCGGGG GACAGCGGGG CTGGGCGGGT GGGGCGGGGG ACAAGCGTGG 180