| Tag | Content |
|---|
EnhancerAtlas ID | HS042-00985 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr1:27125630-27126770 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| JUN(var.2) | MA0489.1 | chr1:27126510-27126524 | AAGAGGTGACTCAG | + | 6.18 | | Myod1 | MA0499.1 | chr1:27126725-27126738 | AGCAGCTGTCCTT | + | 6.07 | | Myog | MA0500.1 | chr1:27126724-27126735 | CAGCAGCTGTC | - | 6.14 | | Tcf12 | MA0521.1 | chr1:27126724-27126735 | CAGCAGCTGTC | - | 6.02 |
|
| | Number of super-enhancer constituents: 34 | ID | Coordinate | Tissue/cell |
| SE_00374 | chr1:27122740-27128620 | Adipose_Nuclei | | SE_03759 | chr1:27125954-27126592 | Brain_Angular_Gyrus | | SE_04138 | chr1:27125302-27127329 | Brain_Anterior_Caudate | | SE_05292 | chr1:27125062-27127172 | Brain_Cingulate_Gyrus | | SE_06169 | chr1:27125196-27127330 | Brain_Hippocampus_Middle | | SE_07337 | chr1:27125282-27126986 | Brain_Hippocampus_Middle_150 | | SE_08106 | chr1:27125310-27127297 | Brain_Inferior_Temporal_Lobe | | SE_11995 | chr1:27125461-27128411 | CD3 | | SE_13729 | chr1:27126347-27127407 | CD34_Primary_RO01536 | | SE_14400 | chr1:27125292-27128728 | CD4_Memory_Primary_7pool | | SE_17869 | chr1:27125342-27128818 | CD4p_CD25-_CD45ROp_Memory | | SE_18323 | chr1:27123723-27129375 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19478 | chr1:27125480-27128087 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20193 | chr1:27125190-27129464 | CD56 | | SE_20972 | chr1:27125642-27128423 | CD8_Memory_7pool | | SE_22451 | chr1:27125047-27129530 | CD8_primiary | | SE_26401 | chr1:27125253-27127503 | Duodenum_Smooth_Muscle | | SE_27476 | chr1:27125500-27126940 | Esophagus | | SE_30012 | chr1:27125303-27127439 | Fetal_Muscle | | SE_31339 | chr1:27126150-27127336 | Fetal_Thymus | | SE_31868 | chr1:27125538-27127050 | Gastric | | SE_37430 | chr1:27125057-27127663 | HSMMtube | | SE_39987 | chr1:27125906-27127235 | K562 | | SE_40913 | chr1:27125059-27127409 | Left_Ventricle | | SE_42523 | chr1:27125327-27127070 | Lung | | SE_44927 | chr1:27125652-27126833 | NHLF | | SE_46170 | chr1:27125200-27127303 | Osteoblasts | | SE_48920 | chr1:27125354-27127039 | Right_Atrium | | SE_50689 | chr1:27125419-27127102 | Sigmoid_Colon | | SE_52190 | chr1:27125898-27126693 | Skeletal_Muscle_Myoblast | | SE_53212 | chr1:27125535-27127116 | Small_Intestine | | SE_53683 | chr1:27125193-27127284 | Spleen | | SE_55445 | chr1:27126057-27127032 | Thymus | | SE_63975 | chr1:27125851-27126842 | HSMM |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I026798 | chr1 | 27125306 | 27128337 |
|
Enhancer Sequence | GAGTAATTTA GGTGGTCTTT CCTTTCAATG AGGGAAAGCA GTAACATCTG GCAGATAAGG 60
TGCCTGTTGT GCCGTTCTCA GATGCCTGCT TACTTGATCA GTAGACATGG GTCAGAGGCG 120
CCAACACGGC GGCAGGAATT GGTAAATTGT ACGTAAGTCC AAGGTGGAAT GAAATGGTAT 180
CTGCCCTGCT TCCTGGCCCC CGTTTGGTCA TGAGCCTATC ACTATAATGG TAGTAAGATC 240
ACTGGCCCCT GCTGAGCTAC TTTTGCCCAT TCCTTGAGCC AGACGAGAGT TTGGCTCTGT 300
ATCATCCATC ACCTCTTTTA TTTCCCATTT AAGCCAAAAC ATCCAGTAAG CAGAAACTCT 360
TCAAAACAGA TGGGTAATCA TAAGCAGCTT CTGGAAAGCC TCAAGAATTG GAATTTTGAC 420
ACACTCCCTC TGACCATGAC AGAAAGCTCA ACTTGCCAGC TGAAGGGAAG CTCCTGGCTG 480
AGCCCCAGCA CCCTCTGTTG GAGCTTCTGG TCAGCCTGGC CAATAAGCAT TTCCCATCCA 540
TCGCCCCAGC ACTAGGACAG CTGAGAGAAT TTGGTTCAGA GTCAAATGCT TCTGAAAATG 600
TACACACAGA TCAGGGCAGC CCTCTGCCTT CTGCCAAGAC ACCAAGTGCC CTTCTTGGCA 660
AACGATGATC ACCCCTGCCC TAGTGTCCCT CCAGTTAGTT GGCAGAAACT GTTCCCTTTC 720
TCCTTGCCAA CAGCTGCAAA TCCAGAGACT TCCACCTTGC GTGCAGGAAG TGTTGGGGTC 780
CTGTTTCAGC TCTTTATTGC CGAGGTAGGA GCACTGGGTT CTTCGCTCTC CTCTTTGCCT 840
CCTTTTGGGG GATAATCAGG ACTGATTATT CCTCTACTGG AAGAGGTGAC TCAGACCCCA 900
CAGAGTAGGT GTGATGTCAC TGCTCTGGCA GTCTCAGTTT AACCTTCACA CTAGATCTCA 960
TCATGCCCAG AAACCTTGTA ACAGGAGCCC AGCTAGGTGG GTGCACCTGG CATGAGCTGG 1020
ACAAGGTTTT CTCTCTGACC TTGCAGGGAT TTAGTTGTTC TCTAAGGAGC TAAGGAATGG 1080
GCTGATTTTA TGACCAGCAG CTGTCCTTTT ACCATCCTAT TAACAGTCTC TTTAATAGTC 1140
|
