EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS040-03614 
Organism
Homo sapiens 
Tissue/cell
Esophagus 
Coordinate
chr1:234851590-234853140 
SNPs
Number: 2             
IDChromosomePositionGenome Version
rs553427chr1234852760hg19
rs556107chr1234853059hg19
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
ETV6MA0645.1chr1:234852460-234852470AGCGGAAGTG+6.02
MEF2AMA0052.3chr1:234851902-234851914ACTAAAAATAGA+6.27
MEF2BMA0660.1chr1:234851902-234851914ACTAAAAATAGA+6.32
MEF2CMA0497.1chr1:234851900-234851915CTACTAAAAATAGAA+6.57
Number of super-enhancer constituents: 33             
IDCoordinateTissue/cell
SE_01816chr1:234851920-234853206Aorta
SE_03123chr1:234851948-234853100Bladder
SE_04206chr1:234851848-234864664Brain_Anterior_Caudate
SE_05210chr1:234852339-234866021Brain_Cingulate_Gyrus
SE_06159chr1:234851621-234865554Brain_Hippocampus_Middle
SE_07154chr1:234851931-234854072Brain_Hippocampus_Middle_150
SE_08108chr1:234852036-234868294Brain_Inferior_Temporal_Lobe
SE_23501chr1:234850856-234854176Colon_Crypt_1
SE_24081chr1:234850921-234851933Colon_Crypt_2
SE_24081chr1:234851981-234853206Colon_Crypt_2
SE_25941chr1:234850948-234863804Duodenum_Smooth_Muscle
SE_26800chr1:234850930-234853175Esophagus
SE_27714chr1:234849701-234863899Fetal_Intestine
SE_28624chr1:234846479-234863924Fetal_Intestine_Large
SE_29677chr1:234852242-234854916Fetal_Muscle
SE_31598chr1:234850948-234853235Gastric
SE_33532chr1:234851300-234853496H2171
SE_38136chr1:234852748-234863540HUVEC
SE_40926chr1:234850897-234863890Left_Ventricle
SE_42335chr1:234851052-234854297Lung
SE_47018chr1:234852767-234853150Ovary
SE_47205chr1:234850913-234851958Panc1
SE_47205chr1:234851968-234863960Panc1
SE_48724chr1:234850971-234851902Right_Atrium
SE_48724chr1:234851922-234853176Right_Atrium
SE_50295chr1:234850736-234862837Sigmoid_Colon
SE_51414chr1:234851031-234863972Skeletal_Muscle
SE_52508chr1:234850914-234854694Small_Intestine
SE_54175chr1:234851139-234851896Spleen
SE_54631chr1:234850764-234864075Stomach_Smooth_Muscle
SE_61992chr1:234850904-234881356Toledo
SE_63435chr1:234845326-234887436NCI-H69
SE_65556chr1:234851662-234853082Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1234851967234852444
Number: 1             
IDChromosomeStartEnd
GH01I234714chr1234849979234864746
Enhancer Sequence
AAGAGAGAGT TTCCATGCGA GGGAGGGGTC ACACGAACTG AATACAGTCC AAAGGACTGT 60
AGGCAGTGGA TGATACTATT TAGGAGGTCT AAATATAGCT CTAGTAATCT CAGCAAGAAT 120
AAGTTACAAT GAAACAATTA CGGGTAAGGG AGAAGCTAGC TAGATTTCAC TGGACTAAAA 180
AGGAGTAAGA AAGGAGTGGC TGGGCACCAT GGCTCACGTC TGTAATCCCA GCACTTTGGA 240
AGGCTGAGGC AGGCGGGTCA CGAGGTCAAC AGATCGAGAC CATCCGGGTG AACATAGTGA 300
AACCCTGTTT CTACTAAAAA TAGAAAAACT AGCTGGGCGT GGTAGCGCAT GCCTGTAATC 360
CCAGCTACTC GGGAGGCTGA GGCAGGAGAA TCACTTGAAC CCGGGAGGCA GAGGTTGCAG 420
TGAGCCGAGA TCATGCCATT ATTGCACTCC AGCCTGGCGA CAGCTAGAGA CTCTGTCTCA 480
AGAAAAGAAA AAAAAAGAAA GAAAGAAAGG AGTAAATGGT GCCAGCAAGA TAGCTACATA 540
GAATGGAAAG AGCAGGGAGG GCCGTGTGGA CACTTAGCTC CTCTGTCTGC AGGTTGTACA 600
ACTTCAATCG TCCGGCAGGC CCGTGAGCAC CTTCGGTGTG ACAGTCTGTT CAGCACTGGG 660
GCTATAAAGA TAAACAAGAC AAAGTCCATG TGCTCAAAGA GCTCTCCGTC TGTGATCCCA 720
GAGAGACATC TGGACAGAGA CGTCAAAATA CAAAACAATA AATTCTGGAC AGAGCAGTGT 780
TTAGCATGAA TCGTGATCTG GAGGACAAAG ACACAGTCCT TGCTGTCACG GAGCTCACCA 840
TTGAGGGATG CCCACAGGCA GCTGAAATAC AGCGGAAGTG ATAAATCTTT AACAGAGGGT 900
GTTTTACTCG GGGCACCCAG AAAAAAATGA AATTTTAACT GCAGATTCAG GAAGTTATCC 960
ATGAAAAGGC GGCAGTTGAT TCCAAACTCC AACAATGCGC TGTCAAGGCT CATGGGCTGG 1020
CTGAGACCGT CACTTCAGGC AGAGGATGTA GCGTTCTGAG GGGAAGAAAA AGTTTTAAAA 1080
AGAAACTTCC AGAGACACTG TCTTGATGCA AGGAGTAAAC ATAAAGTACA AATCTGGAAC 1140
ACAGCGTCAG ACTTATTAGG AAAGTTACTC GGATCAGGGC CTCTGAAATC ACCCAGACCC 1200
GAGCTCCGTA ACTGCTCTGG TATAGAGCTG GGCTCTGTGC TATGGAGACA GTACTGACAT 1260
TTCATCTTCC CGAGGCACGT CCCCTGGCTC CGTGATGTGG CCGTACAACA AGCCTGCCCT 1320
TTGTTACGGT GTGTGCACAC ATGTAAGTGC TCTCGACAAA TCTGTGTTCC TGCCTCTCCT 1380
CCAGTGCTTC TCAGGCAACG ACGTTACCCT TGGCCTCAAG GAAAAAAAAC AGACACCGTT 1440
GGTTGGAGAT TACTGAGTAA ACCTACAACG TCCTCATGCT TAAGGCCCCG TCTGTGATTC 1500
CACCATGAAG GTCACATATC CTCTCTCCTA AAAAGACCTC ATGTCTCCAT 1550