| Tag | Content |
|---|
EnhancerAtlas ID | HS040-01538 |
Organism | Homo sapiens |
Tissue/cell | Esophagus |
Coordinate | chr1:44010990-44012560 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF13 | MA0657.1 | chr1:44011456-44011474 | GAGCAACGCCCCTCTGTG | + | 6.49 | | POU4F2 | MA0683.1 | chr1:44011862-44011878 | CTCATTAATTATTCAG | - | 8.42 |
|
| | Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
| SE_00616 | chr1:44009256-44025211 | Adipose_Nuclei | | SE_03403 | chr1:44004983-44011531 | Brain_Angular_Gyrus | | SE_03403 | chr1:44011667-44013233 | Brain_Angular_Gyrus | | SE_04240 | chr1:44003988-44015177 | Brain_Anterior_Caudate | | SE_05040 | chr1:44001099-44015486 | Brain_Cingulate_Gyrus | | SE_05962 | chr1:44000439-44020958 | Brain_Hippocampus_Middle | | SE_07193 | chr1:44003475-44015024 | Brain_Hippocampus_Middle_150 | | SE_08033 | chr1:44003431-44015175 | Brain_Inferior_Temporal_Lobe | | SE_23218 | chr1:44005985-44017477 | Colon_Crypt_1 | | SE_23829 | chr1:44009144-44011544 | Colon_Crypt_2 | | SE_23829 | chr1:44011550-44012644 | Colon_Crypt_2 | | SE_24870 | chr1:44006024-44012830 | Colon_Crypt_3 | | SE_26649 | chr1:44010798-44020559 | Esophagus | | SE_27645 | chr1:43995619-44017587 | Fetal_Intestine | | SE_28595 | chr1:44005404-44017604 | Fetal_Intestine_Large | | SE_31538 | chr1:44004919-44019003 | Gastric | | SE_41575 | chr1:44001646-44015303 | LNCaP | | SE_47657 | chr1:44011019-44012837 | Pancreas | | SE_50363 | chr1:44005822-44020588 | Sigmoid_Colon | | SE_52524 | chr1:44004832-44019377 | Small_Intestine | | SE_56987 | chr1:44011047-44012016 | VACO_400 | | SE_56987 | chr1:44012027-44012445 | VACO_400 | | SE_65452 | chr1:44004903-44018198 | Pancreatic_islets | | SE_69138 | chr1:44010309-44012639 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I043539 | chr1 | 44005459 | 44020850 |
|
Enhancer Sequence | AGAGCCTCCT TCTAAGGAAT ACCTGGGTAC TTAGGAGCAT CTTTAGGCAC CAGAGCGGGG 60
CAGTCGAATC GTGACCCTGT CTTATGGGGC TGGGGTGAGA CCTGTCCTGG ATTCATGTGG 120
TCATTGTGTG ATGTGCGCGT GTGTGTGCTG TGTGCACTGT TGCAGATCTG TGCTGAAGGC 180
ACAGTGTGAG CTACAGCCAG GGGTCGGCAT GGGAATGGGG GGTGGCACGC AGGGCATGCG 240
TATGGATGTG TGCCCAGGAC GCGGGTGTGT CCATAGGCCC AAGGAGGGTC AAAAGCGGGA 300
GCCACCCATA GCTCTTCCCC TACGCTGGAC CCTCAGGATC CAAGTATGCA GATCTGAGCC 360
CCTCCTTCTC CTTTCATGGG GACCTTCTAG GCAAAGGAGC ATCCCCCCAC CCCAGCTCCT 420
CAGACCTGGA AATGGGGGGA AGATTGTGTT TGGCCGGCAG GAAGCTGAGC AACGCCCCTC 480
TGTGTGTGTT TGTGTTGGAG GGAGGTGGAA TTGTCCCCAT CCAGATCCAA CTCCGAACTT 540
TGGTCCCTTT CCTGCTGCCC TTCCCCCTGC CTGGCACTAT GAGACTGGCC TCAGCCCGCC 600
CCATCGCCAT GGTTACCACT CCTTGGTTAC TGGTGGGAGG CGGGGCACAG GGCAGATTTA 660
GCCAATCTGC AGGCTGAGGG GGAGGGGCGA GGTCGGAGCC AAGGTCCCTG GGGGAAGGGG 720
CCGTTCCCAG CCTGTCCAGA GCCCAGGGGT GATCCAGGGC CAACCCTGGG GTCAGCCCAC 780
GGGTCACCAG GCCATAGGGC TCCCCCACCT GCCTCCGTAT CTCTGGGTAC AGATCTCTCC 840
CCTTGCCCCA CCAGGGCTCT TTCTCCTAAT GGCTCATTAA TTATTCAGGA ACTGATTCTG 900
GAGTGGGGTG GGACTGGTGT GGTCCCGCCC TTTGTCCTCA AGTGCTGGGT CCTGGGTGGA 960
GCTAGAAGGG AAAGGAGAAG GGGCAGGCAT TCCCAAGGGG TGGGGCAAAG GGTCATGGGA 1020
GCACCAGGTA CCAAAGAGAG GGCTGGGCAG GTGAGAGCAA GGAAAAAAGA CAGGTGGGGA 1080
ATCACATGGG GAAGTGGGGC AGGGGATCTC CAGGCCTGGC TGGAACCTGC AGGGGCAGGT 1140
TGGAGTAGAA AGCCTTATCA GGTGTGACCC ACATGGTTGG CAGGAAGGTG AAGGCTTGTC 1200
CACGTGTGGT CAGTAGCTCT TGGACATTGA AGTACTGTCC TTGCCCTCCC CGCCGACCCA 1260
ACCCCAGGCA CTTTCAGGGC CTTCAGACAG GAGCTCTAGG GCAGGGGAAG GATGGCCCAG 1320
TTGGGCTTCA ACAGATAACA CATCCTGGGA GAAGAGCTGC CCTCCTCCTC CTGCCTCAGA 1380
CCCAACGCGC CCCAACCTGT ACCCCTCACT CTCATCCCCC AGCCTGCTGT CTTCCCGTGT 1440
TCTCTCCCGT GAAAGGCATT ACCACCCACC CGGTCACCCA AGTCAGAACC TGGGCCTCCT 1500
CCAGCCTCCT CCCTCCGTGA TATCCCACAT CTAATCCATC ACCAAGCTCC GTTGCTTCTA 1560
CCTTCTGAAT 1570
|
