Tag | Content |
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EnhancerAtlas ID | HS039-00003 |
Organism | Homo sapiens |
Tissue/cell | ESC_NPC |
Coordinate | chr1:1004470-1006320 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF14 | MA0740.1 | chr1:1004737-1004751 | GTGGGGGCGTGGCC | - | 6.39 | KLF16 | MA0741.1 | chr1:1004739-1004750 | GGGGGCGTGGC | - | 6.62 | KLF5 | MA0599.1 | chr1:1004502-1004512 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr1:1004521-1004531 | GCCCCGCCCC | + | 6.02 | Klf1 | MA0493.1 | chr1:1005572-1005583 | TGGGTGTGGCC | - | 6.62 | NRF1 | MA0506.1 | chr1:1004721-1004732 | GCGCCTGCGCG | + | 6.14 | RFX1 | MA0509.2 | chr1:1004774-1004790 | CGTCGCCATGGTGACC | + | 6.11 | RFX1 | MA0509.2 | chr1:1004774-1004790 | CGTCGCCATGGTGACC | - | 6.12 | RFX2 | MA0600.2 | chr1:1004774-1004790 | CGTCGCCATGGTGACC | + | 6.2 | RFX2 | MA0600.2 | chr1:1004774-1004790 | CGTCGCCATGGTGACC | - | 6.2 | SP1 | MA0079.4 | chr1:1004499-1004514 | CAAGCCCCGCCCCTC | + | 6.34 | SP2 | MA0516.2 | chr1:1004498-1004515 | GCAAGCCCCGCCCCTCA | + | 6.23 | SP3 | MA0746.2 | chr1:1004738-1004751 | TGGGGGCGTGGCC | - | 6.57 | SP4 | MA0685.1 | chr1:1004499-1004516 | CAAGCCCCGCCCCTCAT | + | 6.24 | SP8 | MA0747.1 | chr1:1004738-1004750 | TGGGGGCGTGGC | - | 6.11 |
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| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_24070 | chr1:1002554-1005867 | Colon_Crypt_2 | SE_24817 | chr1:1002490-1006081 | Colon_Crypt_3 | SE_27529 | chr1:1001798-1011077 | Esophagus | SE_34539 | chr1:1004454-1006480 | HCT-116 | SE_41944 | chr1:1001963-1005965 | LNCaP | SE_58139 | chr1:1004236-1004768 | VACO_9m | SE_58139 | chr1:1004812-1005267 | VACO_9m | SE_65935 | chr1:1001682-1006445 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I001066 | chr1 | 1001837 | 1006486 |
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Enhancer Sequence | ACCCCTCAGG ACGACCCCAC CGCTACCGGC AAGCCCCGCC CCTCATCAGC AGCCCCGCCC 60 CTGCCTGCCG GCACCTTCCC CCCATCCGTA GCCCCTCCCC AAGCGCGCTT GTCCGCAGGG 120 CTGGACTGCG ACACCGACGT CCCGAAGACG ATCCAGCTGG TTTGGCGGCA GCACTGGGGA 180 ATGGTGCAGA CGGAGGCTCC GTACAAGTTC ACGTACCTGG CGCTGCAGCG GCACATCCGG 240 GGCGAGTAAC TGCGCCTGCG CGAGCAGGTG GGGGCGTGGC CCTGCGGGGC GTGGCCTGTG 300 CGGGCGTCGC CATGGTGACC GGCGGCCCCT CCCCCCAGCG CGAGCCGCCT CAGGAGCGCG 360 AGAACCAAAA CGTGGGCGCC GCCCCCCGCT AATCGGGTTG CAGCCCCCGG CTCCCCGGGC 420 ATCCCCGGTG TGAGTGGAGC GCCGGGGCCG GTCCGGAGTC CTCTGGGAGG GACTGGGACG 480 TGCGGGGTGC AGGGCTGAGC CGCTGCTCCG CGCGCAGAAC CCCGCAGCCC TGGGACGGCG 540 AGGACGCGAA CCTGCGGAGC CGCGGGTGTC TGAGGAGCCG CAGGGAACCC CCGGCCTAGC 600 CGCGCCCGCG TGTGGCCGGA GCTGCGGGCC GGGACTGTGT CCAGGACAGA GCCACAAGCT 660 TGTCCCCAGC TCAGGGAGGT CCAGGGGCGG CAGAGGGAGC GACAGGCTGC GAAGCCCACC 720 GGTGACCACG TGTGAACCCG CGTGCGCCCC CAGCTCGGCC ACTCCGTGCG GGTCTGCCCT 780 CACCGCAGCT CCGGCCTGCC GGCCCTGCCT GCTCCCGTGG TCTGGGATGT GGCCCCGGTG 840 AGGACCCGGC CCCATCAGGC ACAGGGTGGA TGTCTGTGGA GTGAGGTGTG TGTGACATAT 900 TCATGTGACC ACCCGTGCAG CGTCACGCGC CTGGCCCTGC CGATGACAAG GGTGTGGGCC 960 TGCGTGGGCA TGACTGTGTG TGTGACACAG AGTGATGTTG CTGTGACCCG TGGCTGCACT 1020 CCCCACATCA CCGGCTTTCA CAGCCTTCCG GTAAAGTGCT GTGTTCTCCC TTCTGTGTCT 1080 TCGCTGGGAC CTGGGGCAAG GGTGGGTGTG GCCCCCACAG CTGGAGTCAG CTTCTGTGGG 1140 GCCTTCCCGA GCCCTCCCCA CCCTGGACCA GAGGCCCAGC TGGTTGGAGC AGGAAGTACC 1200 TGGGCTCTGG GGTCAGGGAT GGGAAGGCTG AGGAGGCCTG CGTGAGCTGG ACCTGGCCTG 1260 GGCCCTCCTG GCCGTGCCTG CCTGGTGGTG CAGGATTCCT GGGGCTGATG ACAGACGGGG 1320 TAGGGCTGGG GTTGGCGAGC CTCCTGCCGA TACCTCACGT AGCTGACCTC TGACTCTTCC 1380 CCAGCCAGGC TGGCCCTGGG AGTTGCCGGA GAGTCAGTGG ATCTGCAGGC TGCACGCTGG 1440 CTGTTACCTT TGCTTCTGGG TTCCCACAGG GGTCATGGTT CTGTGGTTCT CCAGTCAGGG 1500 ACCCTAGCAG GGCCATGGGG CGTGACTTCC TGGAGGTGTG GCCTAGTATG GCCACGGCAG 1560 AGGATGGGGG AAGAGAAAGG CCCCCTTTGT CAGCCCCCGG GCTCTGAACC AAGCTGAAGC 1620 CCTCCCCCTG GTCCAGCCTG CCCTGCCCCA AGTGTCCTGG GCCTCTCCCC ATCTCCCTGG 1680 GGAGCCTCAC ATTGCTGAGT CGCCAGCCAA CTCCAGAAAC CCCCAGCCTG TCTGCAGCCA 1740 GAGGGGCTGG GAGTTGGACC CCCTAGAACC TTGGGCCCAC CTGTCCCAGT GGCTGCTGGG 1800 AGTCTAATTC TGTCAGGGTA TCCTCTGGGT TGAGGCTGCA GCAGGGGCAC 1850
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