EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS037-00067

Organism

Homo sapiens

Tissue/cell

ESC

Coordinate

chr1:2247480-2248100

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)

MA0730.1

chr1:2247981-2247998

AGGTCAAGCTGAGGACA

6.26

dbSUPER

Number of super-enhancer constituents: 12
ID	Coordinate	Tissue/cell

SE_02233	chr1:2246748-2249115	Aorta
SE_11303	chr1:2241311-2248268	CD20
SE_17322	chr1:2241950-2247953	CD4p_CD25-_CD45RAp_Naive
SE_18225	chr1:2242090-2247806	CD4p_CD25-_CD45ROp_Memory
SE_20385	chr1:2242362-2247581	CD56
SE_23033	chr1:2246416-2247657	CD8_primiary
SE_31962	chr1:2241558-2248183	Gastric
SE_33669	chr1:2242114-2247913	H2171
SE_37917	chr1:2246882-2249138	HSMMtube
SE_46124	chr1:2247475-2248579	Osteoblasts
SE_54996	chr1:2241530-2248343	Stomach_Smooth_Muscle
SE_68719	chr1:2244835-2250031	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002309

chr1

2240883

2251305

Enhancer Sequence

GGACCCAGTG GGGTCAGGTC TGGGGCAGCG GGACAGGGTC TCCAGGACGG GGCCTGGCTG 60
CAGATAGGCC GGAGAACGGC TGCTGGTTCC CTGAGGCCAC TGGGGAGCCA AGATGCAGTC 120
CCCGAGGGGT TTCCAGGGAG CAGCCACTGG GCTGGGCAGC TGGGCGCAGG GGCAGAGAGA 180
GCTGGGGCTG AGTCCTGGCC TGCCCCCTGG GGACTCCTGG GCTGTAAGGC AGGGGTGGGC 240
AGGGCCTGGA CCCTTGTTGG GGGGCCCTCC CTGGCTGTGG TCCACCTCAG GAGCCAAGGA 300
GGCTGGGGGG CTGGTGTGGG CAGCTACCTC TGTTCCCCAC GGGTCCTCAG GAAGGCGGCG 360
CCACAGACTG AGGAGGCCCT GCTGGCCCTG GAGCTGTGTT CGGAGCCCCC ACAGCCTGGC 420
TCCTGGCTCT GGTTGCCGTG GGCGGGAGGT GGAAGTACAA GGAGAAGGAG TGTCCAGCAT 480
TTTCACGAGT GCCACCGCCA GAGGTCAAGC TGAGGACAAG AGGGCAGCCA GGCACCACCC 540
TGGCCCCAGG CAGACTCCCC AGGGCTCGCT GAAGGGCCGG CAGCCCTGGG CCTGGCAGCT 600
CCCCTTGCAA GCCCCAGCTG 620