EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS034-00106

Organism

Homo sapiens

Tissue/cell

ECC-1

Coordinate

chr1:3392630-3394430

Target genes

Number: 12
Name	Ensembl ID

ARHGEF16	ENSG00000130762
MIR551A	ENSG00000207776
MEGF6	ENSG00000162591
RP11	ENSG00000238260
TPRG1L	ENSG00000158109
TP73	ENSG00000078900
WRAP73	ENSG00000116213
RP5	ENSG00000227589
RP1	ENSG00000235169
LRRC47	ENSG00000130764
CEP104	ENSG00000116198
DFFB	ENSG00000169598

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_25201	chr1:3392320-3392954	Colon_Crypt_3
SE_25201	chr1:3393812-3394526	Colon_Crypt_3

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I003475	chr1	3392321	3392954
GH01I003477	chr1	3393813	3394526

Enhancer Sequence

GTGGCCCCGG ACATCAGGGC CACTCGGACC ACTTCCCACT CAGCCCTCCC TGCTGGCCTG 60
CGTGTGAGGT CACACCCCTG AGCCTGAGGG CTGGAGAGTG GGTGCCTGCC CTCATGAGGC 120
CTGGGGGCTG GGCCTCCTAG GGCTGGTGGC TCTGGTCTCT CCAGGCCTCA GTCTCCCGAT 180
CTGGGAGCGC CCCTTGTGGA CCCCTCCCCT AATCCCACTG GGTGGGCCTC TGTGGCCCTT 240
GCCCCATCCC CAGGACTGCA CCGGCAAAGG GTAGACCCTA GGCCCTGAGT GACCAAGCCC 300
AGGGGGCAAC AGGAGTGGCC CTGTCAGTGC ACTTGCCTGG GGCCAGCGCT CCTTGCTGGC 360
CCCTCAGGGG CTGGGCAGGG CCTGAGGACA GAGCGGAGGG GACAGGGTGA TTTCAGGGCC 420
AGCCCAGATT CCATGTTTCC CAGTGAGGCT TGGATTCTGG GTAGGGTGAA ATATTTCCAG 480
CCCAGGCCCG GGCAGCCCTA GTCCCTGCCA CAAACGGGCA GGGCTCATAC CTCTCCCTCC 540
AGAGCCCCCC ACCCACGATC CCACACACTG GCCGCATCCT CTGTTGTCCT GGGACAGCCC 600
AGGGCCCCTC CCCTAAGGCG GGCCCAGGTG GGTCTCCTGT CCTGGTGCCC CATCCAGGGG 660
GTGTCCTTCA GGGTGGAGCA AGAAGTGGGT GACAGGCCAC CAGCCACCCT CACTCAGGGC 720
CACGGACAAC CAAGTAAGGG TGCGGGGTCC CAGCTGGGGG AGGGGGCTCC CGGGGTGGGT 780
CAGGGCGGGC TGCCTGGGGC AGGCGTCAGG GCGGTGACTT CGCGCCGCTG TCGCTGAGCC 840
CACACCCGTG CAGCCCTCAC GCTTGTCTCC CTGATCCTCT CGAGTCTGGG GTGTAACGCC 900
TGCCCCTGCC AGAGCAAGGA CCCCCTCCCA GGCCTGGTCC ACCCCTGAGT GGGGCTCTCA 960
CCCCCACATG GTCTTGAAGT TGGTCTTGGA AACGGGTGTG GGGGTGGGGA GAACAGGCCC 1020
ATCCAGGAGG GAGGGTGGTG GCAGAGGCCG GGAGCGGGAG GTGCCGGGGG CTCTGAGTCT 1080
GTAGTGGGCA CAGGTGGGGA AGCCGGGGCC CACAGGGAGC AGGTGAGGAG GTGTCAACAG 1140
TCGCTGAGGA GCGGGAGCTG GTGGGCAGGC TCCTCATTCC CACTCTGCCC TCCCCCCCAC 1200
CCTGTACTGC CACCCCCTAC TGCGACACCC ATCCCCGTCA CCCCCACACT ACCCACCCCA 1260
TCACCCCCAC ACTGCCCACC CTCTGGCCTT TGCCATCCTT CTGCCCCCCA CTGACTCCAG 1320
CAACTCAGCA CCAGGCAGCA GGGAGGATGT TCTGTGGCTC AGGAGCCAGG AAAGGCCCCA 1380
GACGTGGAGC GTGGCCATCA CGGGTGGGCC TGCCCCTGCC AACCCTCCCT CGGGGCTGAG 1440
CAGGTCCTTG TGCCTAGGAG GCCCAGCGTC TGCGTAATTG CCACGGAGGG GTGAGGTGTG 1500
TGTGGAGGCT TCCCCAGCAC TGGCCTTCGA GTCCTGGCTT GGGTGAAATG TTCAGTGGTC 1560
ACCCAGCCCT GGGCTATCGG GCAGGGTCTG GTCCGGCCTG GCGCACCTCG ATTTGAGGCC 1620
CGGACACATT GTGCCCCTTT CCTCTGTCCA GCCCCGACTG AGGGCAGCCA GCTGGTCACC 1680
CAGTCCAGAG GCAGGAGTCA GTCCCACCTG GTGCTATGCG TCCTTGACCC CCTGGGGACC 1740
TGCTCACCCC GGCTCTGTCC CCCCCAGTCC CTCGCACTGA TCTCCGCCTC CCGGCTCTGT 1800