EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS034-00023

Organism

Homo sapiens

Tissue/cell

ECC-1

Coordinate

chr1:984440-984610

Target genes

Number: 21
Name	Ensembl ID

NOC2L	ENSG00000188976
SAMD11	ENSG00000187634
RP11	ENSG00000231702
PLEKHN1	ENSG00000187583
C1orf170	ENSG00000187642
HES4	ENSG00000188290
ISG15	ENSG00000187608
AGRN	ENSG00000188157
KLHL17	ENSG00000187961
RNF223	ENSG00000237330
C1orf159	ENSG00000131591
MIR200B	ENSG00000207730
MIR200A	ENSG00000207607
MIR429	ENSG00000198976
TTLL10	ENSG00000162571
TNFRSF18	ENSG00000186891
SDF4	ENSG00000078808
B3GALT6	ENSG00000176022
UBE2J2	ENSG00000160087
RP5	ENSG00000230415
SCNN1D	ENSG00000162572

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:984539-984550	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:984540-984550	GGGGCGGGGC	-	6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_24817	chr1:984004-984505	Colon_Crypt_3
SE_24817	chr1:984534-987233	Colon_Crypt_3

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I001048	chr1	984005	984505
GH01I001049	chr1	984535	987233

Enhancer Sequence

TGGGCGGGGA GGGGACGGGG CCGGGGCAGC TCAGGTGGGC GGGGAGGGGA CGGGCGGGGG 60
AGGGGGGGCC GGGGCAGCTC AGGTGGGTGG GGTGGGGACG GGGGCGGGGC AGCTCAGGTA 120
GGCGGGGTGG GGACGGGGCC GGGCGATGGT CCTGAGCACC TGCTCCTGCC 170