| Tag | Content |
|---|
EnhancerAtlas ID | HS028-00286 |
Organism | Homo sapiens |
Tissue/cell | Colo829 |
Coordinate | chr1:205216280-205217160 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CREB1 | MA0018.3 | chr1:205216461-205216473 | GGTGACGTCACT | + | 6.22 | | CREB1 | MA0018.3 | chr1:205216461-205216473 | GGTGACGTCACT | - | 6.22 | | KLF13 | MA0657.1 | chr1:205216606-205216624 | CAGGAATGGGCGTGGCCC | - | 6.51 | | KLF14 | MA0740.1 | chr1:205216609-205216623 | GAATGGGCGTGGCC | - | 6.42 | | Klf12 | MA0742.1 | chr1:205216608-205216623 | GGAATGGGCGTGGCC | - | 6.6 | | RREB1 | MA0073.1 | chr1:205216878-205216898 | CCCCCACTCCCCCACACCCC | + | 6.02 | | SP3 | MA0746.2 | chr1:205216610-205216623 | AATGGGCGTGGCC | - | 6.07 | | TCF3 | MA0522.2 | chr1:205216328-205216338 | AGCAGGTGTT | - | 6.02 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_03194 | chr1:205215467-205219492 | Brain_Angular_Gyrus | | SE_03963 | chr1:205203892-205222020 | Brain_Anterior_Caudate | | SE_04837 | chr1:205195357-205233585 | Brain_Cingulate_Gyrus | | SE_05801 | chr1:205203500-205232939 | Brain_Hippocampus_Middle | | SE_06736 | chr1:205203625-205232876 | Brain_Hippocampus_Middle_150 | | SE_07799 | chr1:205203650-205232693 | Brain_Inferior_Temporal_Lobe | | SE_08922 | chr1:205216422-205216600 | Brain_Mid_Frontal_Lobe | | SE_08922 | chr1:205216607-205216852 | Brain_Mid_Frontal_Lobe | | SE_08922 | chr1:205216879-205217012 | Brain_Mid_Frontal_Lobe | | SE_08922 | chr1:205217070-205217316 | Brain_Mid_Frontal_Lobe | | SE_61423 | chr1:205183427-205322469 | Toledo | | SE_65493 | chr1:205216538-205217166 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 4 | Chromosome | Start | End |
| chr1 | 205216656 | 205217121 | | chr1 | 205216742 | 205217034 | | chr1 | 205216343 | 205217153 | | chr1 | 205216378 | 205216634 |
|
Enhancer Sequence | AGGTGTATGG CCTGGTTGAT CTTTATAACA TACCTGTGAA GTTGGCAGAG CAGGTGTTAT 60
CTCCATTTTA CAGATGAGTA GACTAAGGCC TAGAGGAAAA GAGACTGCTT GCCTATGGCA 120
CCCAGCTAGG TCTTGGCAGG GAGACAAGGG ATCCTAGTCT GTACCCAAGA CTCATCTGAG 180
AGGTGACGTC ACTGAACCCG GCTGGGGACC ATTTTATGCA AAGTCTATGG AGAGCAGGTT 240
TGCCTCAGCC CGAGTGGGAT GATTTTATCT CTTGGTTGCC ATTTCCCCTT CAGTTGCATA 300
GATTTCCTGA CCTGGAGCTG TCCTTCCAGG AATGGGCGTG GCCCTGGGGG TCCTGAGGAG 360
AGAAAGGTTG CTTCCCTGTC ACAGAGGAAA AAGGTCTTCC AGCCATCGGT AAACCCTGCT 420
CTGTCAGCTG ACTCCCCCAG ACCCAGAGGC CCTGGGCTGG TGTGAGAAGC AGTAGTGGTT 480
CTGCCCTGAT CTCTGGGCAT GAATAGGAGG TATTCTTCTC TCCCTAGTAA ACACAGCCCC 540
ACATGCTCTC TGCAAGATCC CTGGCGGTTA CTAGCATCTA TTTTTAATTC ATAAGCCTCC 600
CCCACTCCCC CACACCCCCT GCCATTGTTT AGAACTCACC AGCTGGCTTT CGGACCAGAG 660
CAGCCCTGGC AGGGTTGAGT CCAGCCCTGG CGGGGTTGAG TTACCGAAAC ACCCTGGAGG 720
CAGCTAAATT TCCTCAGCTG TCCTGGAGAG GCTCACCCCA GCCCCACCCC AAGAAAGTAG 780
GAGACCTCAA GCCCCAAAGG GAGCAGGGTG TGACGGGGGA CAGATAGGGG CTCACGGTCC 840
AGGGAAGCAG CTCAGCCTTG GTGATGGTAA TTTGGCTGTT 880
|
