| Tag | Content |
|---|
EnhancerAtlas ID | HS028-00039 |
Organism | Homo sapiens |
Tissue/cell | Colo829 |
Coordinate | chr1:25890280-25891010 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr1:25890322-25890339 | TGACCTCTGGGTGAGCC | - | 6.08 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_02010 | chr1:25890927-25896559 | Aorta | | SE_03472 | chr1:25886787-25890526 | Brain_Angular_Gyrus | | SE_03472 | chr1:25890604-25897057 | Brain_Angular_Gyrus | | SE_04384 | chr1:25883710-25897130 | Brain_Anterior_Caudate | | SE_05146 | chr1:25875255-25899602 | Brain_Cingulate_Gyrus | | SE_05991 | chr1:25873945-25899913 | Brain_Hippocampus_Middle | | SE_06990 | chr1:25882590-25898188 | Brain_Hippocampus_Middle_150 | | SE_08141 | chr1:25882606-25897422 | Brain_Inferior_Temporal_Lobe | | SE_15269 | chr1:25881504-25892507 | CD4_Memory_Primary_7pool | | SE_16249 | chr1:25886217-25892811 | CD4_Naive_Primary_7pool | | SE_17633 | chr1:25869448-25897028 | CD4p_CD25-_CD45RAp_Naive | | SE_19031 | chr1:25874010-25893424 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_24457 | chr1:25890007-25890719 | Colon_Crypt_2 | | SE_53664 | chr1:25874991-25896829 | Spleen | | SE_65397 | chr1:25887914-25896024 | Pancreatic_islets |
|
| | Number: 3 | ID | Chromosome | Start | End |
| GH01I025563 | chr1 | 25890441 | 25890490 | | GH01I025564 | chr1 | 25890883 | 25890910 | | GH01I025559 | chr1 | 25886294 | 25890330 |
|
Enhancer Sequence | GGGTGAGTGG TTGTGTGGCC AGCAGATCGG TGATCCTCAG CCTGACCTCT GGGTGAGCCT 60
GGGGCTGCTC CAGGGACCAG GCCCTGGGAC CCGTGACTTG TGGGCCTCTG GGAGGACCAG 120
ACCCAGCCCG GTAGTGCCCA GGCGCAGGAT AGGGGATGAA CAATGTCCCT TTTGAACCTG 180
AGGCTGCATC CCCAACAGGC TTGGCTCCCA GCACAGCTGT CTCCTCACAA TGCTTGGCCT 240
CTTGGCCTGA GCGTCCACGG CTCTGCCCAC CACAAGACCA GCCAAAGGCG CCCTTGTTCT 300
TGGTGTGGCA GAGCTCGCTC CTACCACCCC TCCCCCTCAG CCGCCTGAAT GAGGACCCAG 360
AGACTTGGGC AGTCACCAGC TTGGTCCCTG ACTCCCTCAG GGACTCAGGG CAAGCCCCCT 420
GACCTCTCTG TCTCAGCTTT TTCATCTCAG TAAGGGTGAT GACCTCTGCC AACGGAATCT 480
CCCCGAGGAA CCTGAAATTT AATTTTAATT TTTCATTTGG AAATAATTTC AGACTGTGTT 540
ACAAAATTAG TACAGAGAAT TCCTGTTCAC CCGTCATCCA GATTCCCCAA TTGTTAACAT 600
CTTGCATGAC CACATTACAC TGGTCAGAAT CAGGAAACAA ACACGATACT GTGCTGTTAT 660
ATAATCTATA GAACTTACAC ATTTCTCCAG GTGCCCCTTC AGTGTCCTGT TTCTGGCCCA 720
GGATCCATTG 730
|
