EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS025-00102

Organism

Homo sapiens

Tissue/cell

CMK

Coordinate

chr1:43397700-43398010

dbSUPER

Number of super-enhancer constituents: 41
ID	Coordinate	Tissue/cell

SE_01795	chr1:43397398-43398157	Aorta
SE_05390	chr1:43397289-43399585	Brain_Cingulate_Gyrus
SE_06192	chr1:43395065-43405505	Brain_Hippocampus_Middle
SE_07319	chr1:43396705-43398566	Brain_Hippocampus_Middle_150
SE_08269	chr1:43397488-43399602	Brain_Inferior_Temporal_Lobe
SE_10377	chr1:43396392-43405534	CD19_Primary
SE_11009	chr1:43387831-43425728	CD20
SE_12470	chr1:43397348-43399808	CD3
SE_12535	chr1:43397880-43398025	CD34_adult
SE_13825	chr1:43396778-43399313	CD34_Primary_RO01536
SE_14471	chr1:43395753-43414527	CD4_Memory_Primary_7pool
SE_19657	chr1:43396427-43405202	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20345	chr1:43395492-43405550	CD56
SE_20799	chr1:43396312-43405729	CD8_Memory_7pool
SE_22754	chr1:43395674-43405513	CD8_primiary
SE_23189	chr1:43397346-43399720	Colon_Crypt_1
SE_23904	chr1:43397399-43399265	Colon_Crypt_2
SE_25177	chr1:43396926-43398787	Colon_Crypt_3
SE_26580	chr1:43395721-43413249	Esophagus
SE_29267	chr1:43397108-43398616	Fetal_Intestine_Large
SE_31882	chr1:43396701-43399114	Gastric
SE_33837	chr1:43396695-43400408	HCC1954
SE_34353	chr1:43395339-43412997	HCT-116
SE_37191	chr1:43393285-43398371	HSMMtube
SE_39883	chr1:43397369-43405479	K562
SE_41620	chr1:43397520-43399349	LNCaP
SE_42796	chr1:43396336-43399368	Lung
SE_50202	chr1:43396219-43406255	Sigmoid_Colon
SE_54088	chr1:43396020-43399837	Spleen
SE_55340	chr1:43396132-43399459	Thymus
SE_55821	chr1:43396763-43399673	u87
SE_57045	chr1:43396858-43405413	VACO_400
SE_57417	chr1:43397518-43398729	VACO_503
SE_58269	chr1:43397518-43398137	VACO_9m
SE_58561	chr1:43388242-43430420	Ly1
SE_60624	chr1:43388552-43428820	DHL6
SE_62392	chr1:43388423-43425814	Tonsil
SE_64094	chr1:43397486-43398043	HSMM
SE_64340	chr1:43397259-43405516	NHEK
SE_67781	chr1:43396763-43399673	u87
SE_68708	chr1:43393050-43401454	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I042929

chr1

43395541

43414526

Enhancer Sequence

CTGGTGTGAC AAACTCACAC ATGTCACCCT TCAGAAGTGC TTGAAAGACT CACGCTGTGG 60
CTTTCTGTTC CCCAGGCCTA GCTCCCTTGT GTCTGGCCTG CGAGCACCCC CTTGAAGGAC 120
CCACGGCCTC CTCCCCTCTC CCAAGGGCCC AGCTAGGAGG TATGGGGAAA GGTTCCACAC 180
AAGGAAGCAG TTCCAGGAAC TGGAAACGCC CGTCCTAGGG CAGCCCTGCC CACCAGCCCT 240
GCCCCCACCC TGGCCAGCTC CCACGGATGT GGTAGGCAGG CAGCACCCGT TCTGCCTGAG 300
CACACTCACC 310