EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS024-00687

Organism

Homo sapiens

Tissue/cell

Cerebellum

Coordinate

chr1:53855680-53856800

Target genes

Number: 5
Name	Ensembl ID

RP4	ENSG00000230953
ECHDC2	ENSG00000121310
RP5	ENSG00000236723
C1orf123	ENSG00000162384
MAGOH	ENSG00000162385

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:53856141-53856162	AAAAGGGAAATGAAACCAAGT	-	6.03
ZNF263	MA0528.1	chr1:53856209-53856230	GAAGGAGGAGAAGGGGAGTGG	+	6.69
ZNF263	MA0528.1	chr1:53856215-53856236	GGAGAAGGGGAGTGGGGAGGA	+	6.88
ZNF263	MA0528.1	chr1:53856212-53856233	GGAGGAGAAGGGGAGTGGGGA	+	7.39

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I053390

chr1

53855873

53856351

Enhancer Sequence

GTAAGAATGA GCAGAACCAG CCAGTGTGAG GGCATGGACT CAGCAAGCCC TGAGGAAGAA 60
CAAAGGGCAG ATCTGAGAAC TTAGCAGGCA GCCTCAAAAG GACTTGAGGA GTAGCTGGAT 120
TTGAGTGGGT TTGGGGGACA GAGAGAAGGA CCTGCCAGGG GGTCAAGATC ATGTAATCCA 180
CCAAGGCAGA GAGTATGAGG AGCAGGAACG TGAAAAGACA CCAGCTGCCA CATCCCAATT 240
GTGCAGTCTG GGTGCCCCTG GGCATCCTGG TGCTTGCCCA GTGGGCCACT GGTCGTGTGT 300
GTCTGCGGGT CAGAGAGCTC CAGGCCTGAG CAGACAGCAT GATGGTCAGC AGAGGGAAGC 360
GTCTGGAAGC CTTGAGAGTG GAGACATTGC CTCGGGAGGA GGCAGAGGAG CCAGGGCCAG 420
GTGCCAGGGG ACACATACAT TAAGGGAACA CCAGGCTCTC GAAAAGGGAA ATGAAACCAA 480
GTGGCCTGTT TTCCTGCCAG CTCCTCCCTG GCTGTGACTT GAGACAGCAG AAGGAGGAGA 540
AGGGGAGTGG GGAGGACTCT GGCCCTGAAA TTGGAGGAGA CAGGCCTCAC AGAGGCACCA 600
GACAAAGGCA CCCCCTCCAA GGAACTCACC AACCTGGTTT CCTAATGTTC CAATCTATGT 660
GTTTTTTTGT TTTGTTTTGT TTTTTTTTTA AAGAAGTTGG GCCAAATTCC AATCTGTAGT 720
CCACCAGCCC TTCTGCTCTT TCCCTTTTCC TTCACTCATG GACCCAGAAG TTACCGAGTG 780
CCTACCACCA GGCTGCTGCT GGAATACCCT GGGGAATGAA TCAGACATAG TCTCTGCCCT 840
TAGGGACGGG CGTTCCAGGC TGGTGGCAGC CAGGTTAACA AGGGGGCTGG CAGTGACTCC 900
CACAGGGCTC TCTGGAGGGT CAGCTCCAAA CCCTTTTCTT CTCTGTTTCC AGCATTTTGT 960
TCTCCCTTAA CATAGGTGCC CCTCAGCGCA TGGGCCCGCC TCCTCTGCCA CACTCTCCCA 1020
TCTCCCGGGG AACATCTCCA CCCTCGAAGC TTTCAGCCGC TCCCCTCTGC TGACCACTCA 1080
GCTTACTCAG GCCCAGAGTT TTTTCCTTTC TTTCCTTCTT 1120