| Tag | Content |
|---|
EnhancerAtlas ID | HS024-00435 |
Organism | Homo sapiens |
Tissue/cell | Cerebellum |
Coordinate | chr1:27918760-27920760 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Myod1 | MA0499.1 | chr1:27919574-27919587 | AGCAACAGCTGCG | - | 6.19 | | Nr5a2 | MA0505.1 | chr1:27919177-27919192 | GCTGGCCTTGACCAC | - | 6.24 | | RFX2 | MA0600.2 | chr1:27919031-27919047 | CATCGCCATGGCAACC | - | 6.06 | | ZNF263 | MA0528.1 | chr1:27919731-27919752 | CCCCTCCCCCTCCACTCCTCC | - | 6.77 | | ZNF263 | MA0528.1 | chr1:27919726-27919747 | TCCCTCCCCTCCCCCTCCACT | - | 6.9 |
|
| | Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
| SE_00861 | chr1:27914193-27931151 | Adrenal_Gland | | SE_01588 | chr1:27912079-27922411 | Aorta | | SE_03939 | chr1:27919012-27929651 | Brain_Anterior_Caudate | | SE_05814 | chr1:27913859-27923243 | Brain_Hippocampus_Middle | | SE_07770 | chr1:27919197-27930846 | Brain_Inferior_Temporal_Lobe | | SE_26518 | chr1:27909071-27932559 | Esophagus | | SE_29557 | chr1:27915462-27922531 | Fetal_Muscle | | SE_31394 | chr1:27920375-27921463 | Gastric | | SE_33503 | chr1:27915499-27922187 | H2171 | | SE_40593 | chr1:27913008-27932820 | Left_Ventricle | | SE_42106 | chr1:27913545-27918982 | Lung | | SE_42106 | chr1:27919078-27932390 | Lung | | SE_46630 | chr1:27918448-27919046 | Ovary | | SE_46630 | chr1:27919125-27919722 | Ovary | | SE_46630 | chr1:27919880-27920669 | Ovary | | SE_48058 | chr1:27914444-27919029 | Psoas_Muscle | | SE_48058 | chr1:27919076-27931233 | Psoas_Muscle | | SE_51091 | chr1:27913567-27922874 | Skeletal_Muscle | | SE_54056 | chr1:27911548-27931728 | Spleen | | SE_54527 | chr1:27912777-27922283 | Stomach_Smooth_Muscle | | SE_62470 | chr1:27916580-27996594 | Tonsil | | SE_65253 | chr1:27915143-27922215 | Pancreatic_islets | | SE_68682 | chr1:27918827-27923822 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027588 | chr1 | 27914885 | 27923473 |
|
Enhancer Sequence | CAACCACACC CCCTGCCTGT CATCCACAGA GCCCGTCACC ACCCAGCTTG TCACCTGCCT 60
GCCTCGCACC CGCACCACCT GTCACCCACC CAGCTCGTCA CCCACCCAGC CCATCACCTG 120
CACCACCTGT CACCCACCCA GCCTGTCACC GGAGCCGCCT GACAGACATC TGGGTGGGGG 180
ACAGGAGATG GGGAGGAGAA GACCACAGGG GTGCGGAGCT GGGGGCCCCA GAGACCCTGT 240
GGGACCCCCA CTTCAGCTCG GCATCCTGCA GCATCGCCAT GGCAACCTCT CAGCCGCAAC 300
CACTTTCCCA AACATCCCCC GCCCTCCCCC CCCCAGGCCC TGCTCTTAGC TGAGCTGAGG 360
CTGAGAAGAG CCTGAGTGAC AGCAGAATGG GGCAGGAAGG AGGGGGCTCC CCAGCTGGCT 420
GGCCTTGACC ACCCTTGCAC CCCTCTGGAC TCGGTTGCTC CATCTGCAAA ATGGAGGGGC 480
CGGAACGCAG GAGGCCCCTG TAGACAGGTC ATCCCTCTCT AGCCTGGATT GGCTGAGCCG 540
GCTGCCGGTT AACCTGTGAG GGCTGGGGGT GGGACGAAAG GACCCAGGGT TTCTGGGTTC 600
TTCCGCACTC CTCTACCTCG GGCCCAGCTC AGAGAGGCTT GGGCCCCTGG CCCAAGCTCA 660
CACAGCAGAC GAGGAGGCGC AGGCTGGACG GGAGAGGGGC TCTGCCAAAG GCCTGCCAGC 720
TGGAGGTTCC ATACTGGGTG ACCCAAGGTG ACCAGGGGCA GAGTTGGCCC CACCTCCGAG 780
CTGCATTATT TATAAAACCC AGAGCAAGGA GCTGAGCAAC AGCTGCGGTG CTGCCCCTCC 840
AGGGGACACA GGCCTCGGTG GAACGGAGTA GACACGGTGT CTCCTCAGGG AAGGCCCCTA 900
GGGTCCCGGG CTCCCTCCAG GGCTGGCTGG GGCAGGGGCT GAGGTGGGGA AGGGGGAGCA 960
GCTCCGTCCC TCCCCTCCCC CTCCACTCCT CCAGGCAGGC AGCGATAGGA TTACTTCTGC 1020
ATGACTGCCC GCTCCACAGG GTTCCAGAGA CCCTCCTGCC TGCAGCAATC TTTAAAATTC 1080
CTCCAGCCCA ACCTCTCTCC CTCTCTCCCT GCAGTGAATG CCCCAGAGTC TACCGCAGTG 1140
TGCCCACTGC TGCCGCCACC ACTACCCCCA GGCAGGCTGG GACCCAGGTC CCTGGTGTCC 1200
ATGGGCAAAG ATGGACCCAT TCTCAGGGCG TAGCCGTGTG TCCCTCAGAA CCCTAAGACC 1260
CAGGCCCTGG CCCATTCCCT CTGGCCCTTG GTGCTGCCCC AGTCCCACAG CCACGGCTCC 1320
AGCTGGGGTC AGGCATGCCA GCTGTGCCAG GGCGGATGGG CACATATGTG CAAACACCCC 1380
CGGTGGGTCT TGGCATGCCT GCCCATGGGC TTTGCTGCCA GAACCTGGCT GCCCCACCTC 1440
TGCTCTGAAC CCCTCCCTAT CTCACCAATC CCTGCTATCC CCCCAGGGTG GGCAGACAGC 1500
TGGGCTAAGC CAGTGCCTGC GGCTCCCCAG GGCACAAGAG GCAGGCAGGA GATCGATTCA 1560
CTGAATTTTT TAAGGCCCTA ATGGAGCCTG CATCCCAGGA CTTGCTGGGC TGGGACACAG 1620
GCGATGTCTT GGGGACCCTT CCCACAGCAC TGCAGTTGCT TCTTCTTTAG GGTCTTGGGG 1680
ATCAGTGGAG CCCTTCTGTG AGCCTTCCCT CAGCAAGAGA GGAGGCACGA GGGACCTCTA 1740
GGAAAGAGAA GGGATTTGGG GGCTGTGAGC AATACCCAGA GCCCCCCTAT CTCCCCAGTC 1800
CTAATGCAGG CAGAAGCAGC TCAGCCTCTA AATCACTCCC CTCATGCTGC CCTCTGAGGC 1860
GGATTCTGTG CATCTGTAAT TAGGGGGTGG AACAGATGGT GGAGATTCCG TTTAAAATCA 1920
TGCATCTAGT AAAGTAACCT TCACTGTCGG AACTGACTCC CAGGGAGACC AAGCCCCGCA 1980
GCCTGGATTT GGGGGTGGGG 2000
|
