EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS024-00018

Organism

Homo sapiens

Tissue/cell

Cerebellum

Coordinate

chr1:1407470-1408020

Target genes

Number: 22
Name	Ensembl ID

RP11	ENSG00000231702
SDF4	ENSG00000078808
ACAP3	ENSG00000131584
AURKAIP1	ENSG00000175756
MRPL20	ENSG00000242485
VWA1	ENSG00000179403
ATAD3C	ENSG00000215915
ATAD3B	ENSG00000160072
ATAD3A	ENSG00000197785
TMEM240	ENSG00000205090
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr1:1407480-1407490	GGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:1407485-1407495	GGGGCGGGGC	-	6.02
Myog	MA0500.1	chr1:1407662-1407673	CTGCAGCTGTC	-	6.62
Tcf12	MA0521.1	chr1:1407662-1407673	CTGCAGCTGTC	-	6.14

Enhancer Sequence

TGAGTGCGGC GGGGCGGGGC GGGGCGGGCG GGCGGGCGGG ACGGGCCGGG GAAGCGGGAG 60
CCCTGGCCCT TGCCGCTCCT CGCTGCTGTC GGCAGCCACT TCCCGGGCGA GACTGCGCCC 120
CCGGAGCACC CCCGGCCGGA GCCGTCTCGC GTGCCGGGAG GATCGGACTC TTTCCGTCAC 180
CCGTTTGCAC CTCTGCAGCT GTCAGGAGCG GGTCAGGTGC GAAAAGCGGT GCGGAGGTGG 240
CGCTCATAGG TTACAGGGGT CAGGGTCTGG GGCTGGCCGT GGTCTTCAGT TACCGCCGAG 300
CGTGCGGGAT CCTTCTGCGC TTGCCGCCTC CACGTGGCAC AGGCCAAGGC GTGGCCAGAT 360
GGGTAGATGG GTTTGTTGGG TGGTTGCTAG CAGTTTCCAC GTAACAAGGG AAGCGTATTT 420
GAGAGTTACT TGATTCTAAC GAGACTAGCA GATTTGCACT TCTTGTTGGA AGACGTTAGC 480
ATTTGCACGG CGAGGTCTGT GAAGCCACAG GCCAGGCCGT GCTGCTCAGC TTGAGTAAAC 540
CCCTGACCCA 550