Tag | Content |
---|
EnhancerAtlas ID | HS023-02276 |
Organism | Homo sapiens |
Tissue/cell | CD8+ |
Coordinate | chr1:208045540-208048210 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Gata4 | MA0482.1 | chr1:208047056-208047067 | TCTTATCTCCT | + | 6.14 | NR2C2 | MA0504.1 | chr1:208045787-208045802 | AGGGGGCAGAGGTGA | + | 6.1 | Nkx2-5(var.2) | MA0503.1 | chr1:208047413-208047424 | CTTGAGTGCTT | - | 6.02 |
|
| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_09440 | chr1:208045387-208047436 | CD14 | SE_12436 | chr1:208045617-208047564 | CD3 | SE_12687 | chr1:208046287-208046687 | CD34_adult | SE_13353 | chr1:208045825-208047569 | CD34_Primary_RO01536 | SE_17929 | chr1:208045441-208047869 | CD4p_CD25-_CD45ROp_Memory | SE_25552 | chr1:208045257-208049387 | DND41 | SE_31189 | chr1:208033970-208047817 | Fetal_Thymus | SE_37661 | chr1:208045584-208047615 | HSMMtube | SE_39422 | chr1:208045475-208047730 | Jurkat | SE_39422 | chr1:208047866-208048558 | Jurkat | SE_49854 | chr1:208042411-208047765 | RPMI-8402 | SE_49854 | chr1:208047937-208048551 | RPMI-8402 | SE_53314 | chr1:208046034-208047133 | Spleen | SE_55308 | chr1:208046240-208046580 | Thymus | SE_55308 | chr1:208046649-208046992 | Thymus | SE_66285 | chr1:208045475-208047730 | Jurkat | SE_66285 | chr1:208047866-208048558 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 208046255 | 208047444 | chr1 | 208045551 | 208045915 | chr1 | 208046081 | 208047169 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I207872 | chr1 | 208045576 | 208047537 | GH01I207874 | chr1 | 208047867 | 208048558 |
|
Enhancer Sequence | GTAGACATGG TAAAGCAATT TGCCTAAGGT CACCCAGATG GTTGCCAAGG AACAGAGGCC 60 TGACATGGGA TTTCAAGCTC AGACTCTCTC CGCCACATCA CCACTGCTCC TCTCTCCATC 120 CCCAAAGTAG GTATCGATGT TGGGACACGT ACATGTTGAC ATCCTGAGGA TCATGCAGCT 180 CATAAATGTC ACCACTGACC GCTTCTGAAG GGTTTTTATG TGTGTGTGGA TGTGTTTGTT 240 GAGGCACAGG GGGCAGAGGT GAGTTGTTGG TAGAAAATGG ACTATATATC AACAGTTACC 300 AAGATAGGAA AGAATGGGGT GGGGAGGAAT TGGCCTTGGC CTTGGGTCTG ACCCTATGCT 360 CTCTATCTCT GCCCCTTCTC TTACTCTAAT GGGGCTACCT CAATTGACAG CCCCCTTTAC 420 TGTGTAGTTG GACCCCCGCA GGCTCTGAGC TTCTCAGAAG CTGGAGATCT TCCATTTCCT 480 CCATATTTTC AATTCTGTCC ATCAGCAAAT GTTTATTGAG CTCTTACCAA GTGCTTTGTC 540 ACAGCCCATG GAAGCCTGGC CAAATTGCTT AACCTCTCTG AGCCACAGTT TCCCCATTCT 600 GCAAAATGGG ATTGATAGCC CATCACATGG CTGTTGGGAG GATTAAGCAA GATAACCTAT 660 CAACTGTTGG TGAGCTGTTG CTAGTGGAGA CACCTGCCCC CAAACCCCAC CCTGTGTCTG 720 CTATTTTTCA TATGAATGCA AGGGGATGTC TGCTTAGTAA CTAGGGGACA GAGCAGATCG 780 GAGGAGCTGG GAAAGTGAGA AAAGGAGTAT GAAGGCTGCA GTACTCCTCA ATGTGCATTT 840 GTCGGGGATA TGTAGATGGC TGTGGGGCTC AGAGCTTGTT GGAACTCTTG AAGAATGACT 900 TGTGAGTTTC TGGACCCAGG CAGAGCCCTT TGAGCTTGCA AAACAAGGTC AGGCACGGTG 960 ATGAGAGGCT TTCCCAAGCT CTTGGTGGGC GGGGAGCACG AACCACTGAG AGCCACAACA 1020 GGAGAGGCAG AGCAGAGCAG CCATCTTTTG GTGACCACAG CTGTGAGGGC TCATCTGAGG 1080 TCCCTTTTTG GGAACTCCCA GAAATAACTC AAGGGCATCT GAGAATGTAG ATGAAATCAT 1140 CAGACAAGAT ATTACAAACA TAAAGAACGG AGGTGGTGCC AGGCACATAG TAGGAGCAGA 1200 GTGCCTCTGC CCCTCGGTCT TCTGATTATG CTGCCTTGGC ACTAAGCATG TTTGTTTCTC 1260 ACTGTGTCCT GTGCTGTAGG GAACACCCAG TGGAACTGCC CTTCACAGAT CCCTGAGTGT 1320 GGTTACAGTG GTTTTTCTCT TTAAAGATTA AATCTTTTTT TCCCCTTTCT GCTCAACAAA 1380 GACAACAGCC TTTTGGTTTT TGATAAACGT TCTTTTCCTA CTAGCAGGTG GATATGCCCG 1440 GGGCACTAAG AACTGTGCTT TTAAAACACA CACAAGCCCA GCTGTTTGAA TCTGCCACTT 1500 CTGTATGTCT TACTTCTCTT ATCTCCTGCC CCCGGGGCTG AGTTTTCTCT GCCTTGGCAG 1560 GCTGATAACA TGTGGAAGGA AGAGAACAGT TCTAATTAAT AGACTAATTA GTGGTACAAG 1620 TCTTTAATAG CTGATTATAG GGAAGTCATT CCCCACCCCC CAAGTGATTG ATTTATTTAT 1680 TGCTGTTGTG CTGCATTATT GCAAAATAGT CAGCTTCTAA TTATCTATTG GCTGGTTCAA 1740 TCAAGCCTTT TCCTTCTCTT CCATCTTGTT CTTTCCCTTG CTAAGGGAAG GCACAGGCAG 1800 AATGGGAGAA CTCAAGCCAG CTGATGACCA ATTCTGGACA GATATAAGTG TTGGGATCCT 1860 ACTGCCACTC CATCTTGAGT GCTTAGAGCT GGAAGGGGAA TATGAGGTTC AAGGGAAAAG 1920 AAGGCAAGAA AATCCCACTC ATTCTTCTAG GATAACGTCC CCATGGTGGC CATTCCCTCA 1980 TCATCCCTCT GACTCTGCAC GCCATAACTC ACACACATTG TCAGTTGCAT TAAAAAACAG 2040 TATAGTTAGG AAACAAGCAT GAGAAGACAC AAAAAGAAAA AAATTAAATA CAAAATAGTG 2100 TAGCGTGGAG CTTAAAAGCA TGCACTAGGC CGGGCGCAGG GGCTTACGCC TGTAATCCCA 2160 GCACTTTGGG AGGCCGAGGC AGGCAGATCA CGAGGTCAGG AGATTGAGAC CATCCTGGCT 2220 AACACGGTGA AACCCTGTCT CTACCAAAAA CCACAAAAAA TTAGCTGGGC GTGGTGGCGA 2280 GCTCCTGTAG TCCCAGCAAC TGGGGAGGCT GAGGCAGGAG AATGGCGTGA ACCCGGGAGG 2340 CGGAGGTTGC AGTGAGCCGA GATCACGCCA CTGCACTCCA GCCTGGGTGA CAGAGCGAGA 2400 CTCCGTCTCA GGAAAAAAAA AAAAAAAAAA AGTGTGCACT GAAATTCAAC AGCCTGGGTT 2460 CCACCTTGGC TCTCCCACTG GCTAGCTGTG TGATCTGGGG CAAGTCTCTT GACCTCACTG 2520 TGCCATATTC TCTAACCTCA TTTGTAAAGT AGGAATATAA TTGTTCCTCC CTAGGACTGT 2580 TGAGGATTAA ATTTAAAAAG CTATGTAAAG CACTTAGCAC AGTACCTAGT ATATACTAAG 2640 CCCTCAAAAA CATTAGCTAT GACAATTACT 2670
|