Tag | Content |
---|
EnhancerAtlas ID | HS023-01413 |
Organism | Homo sapiens |
Tissue/cell | CD8+ |
Coordinate | chr1:117081900-117084000 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:117082160-117082181 | AAACAGAATATGAAAGTAATT | - | 6.05 | Lhx3 | MA0135.1 | chr1:117083419-117083432 | ATTTAATTAATTT | - | 6.07 | REL | MA0101.1 | chr1:117082845-117082855 | GGAAATCCCC | - | 6.02 | SPI1 | MA0080.4 | chr1:117082956-117082970 | GACTTCCTCTTTTC | - | 6.63 | SPIC | MA0687.1 | chr1:117082956-117082970 | GACTTCCTCTTTTC | - | 6.73 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_09788 | chr1:117079120-117088914 | CD14 | SE_19688 | chr1:117081581-117083146 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_27848 | chr1:117080512-117082340 | Fetal_Intestine | SE_28774 | chr1:117080386-117082718 | Fetal_Intestine_Large | SE_32513 | chr1:117080479-117089910 | GM12878 | SE_59077 | chr1:117079459-117152311 | Ly3 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 117082797 | 117083071 | chr1 | 117082028 | 117083400 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I116539 | chr1 | 117082540 | 117083492 | GH01I116537 | chr1 | 117078903 | 117082377 |
|
Enhancer Sequence | AGTTGGGAGG TTTGATCAAG CCTTAGCCTT GGCCTGCTGT GTGACCTGGG GCCACAGTCC 60 TTTTAGGAGC TGGAAGAGTT TTAAGAAAGC ATCCATCCAG GTCTCTTGTT CTACTTACAG 120 AGAAACGGAC TCCTAAACTG TCTTATTTTC ATCTGTGAAA GGGAATGCTG TATCAGGTCA 180 CTGTAAAGGT CAAACAGAAT ATGACTGAGT GCCACATGCA GGGTTTGTAA AAAAGAAAAG 240 AAAAGAAAAG AAAAGAAAAA AAACAGAATA TGAAAGTAAT TTCAGGGGAA ACATGAAGAA 300 GTGTTAGTAT TATCTTCTAA GTTGCTAGAA CTCCCTTGAC TAGGTAGAAG CTCTTTCTGG 360 CTATCTCATT ACACAACAGT TGCCAGATGG CAAAGGTAGA AGTGCCTATC CAACTCATCT 420 AAAAGTGTGC AAGCCTTTCT GCAGCACCTA GATCACAGTT TCTACACCTC AGATCTTTTC 480 CTTCTATAAA TCTTTCATAT TTTCTTGCTG CCCGTGGGAC TTACCACAGC TGTATCTAAC 540 AAATATTCGT TATACCTCTA CTTTAAGCAG CATTAAACTG GCAAGAAATG TGCCTACTTC 600 CTCCCTAAGA CAATTAGTCA ATTTATAATT AATGAATTGA GTTCACTGCT GTGTAAAAAA 660 TGAGAATTTC TTACACATAT CTGATGACAT TTTATAGAAA TATGTGTATA TTTTCACGAA 720 TTTTAGTAAA GGTCAAGTAT CAATCCAGCC CAGTTAAGGA CAGGGCAGTT AATTCTACTT 780 ACATAAAAAT CATCATCTGA GATGTGATGA AGGTCCATAA AAAGATGGGA AAGGACTAAT 840 AAACCTCAGA AGTAGAAATT TTAAGGGGAC TTTTGGGTAT GGAGGAAAGC CAGATCTCAA 900 TGTACACACA GAAGGAAGTG GATGCCCTGA ATTTAGGAAG TGCCAGGAAA TCCCCCTGTC 960 CAAAATATGC TCACTGGAAG TCTCCTATTA GGTCTGGTGT CTCTAGAAGA TTACCAGGTT 1020 ACTAAAACAA GTGTTAACAT TACCTCAAGG AAGTATGACT TCCTCTTTTC TTAAAAAAAA 1080 AAAAAAATAG TATGACCAAT CATTTTATCA TGCAGATGTG AAACCTAGAG TCATCTTATG 1140 TCTTTTTACA ACCAAAACCT ACATCTTGCA GACTCTTTCT TGGACCCTCT ATCTACCTGG 1200 ATGATAGTAG CTTCTAACTT GACATCTCCT CTCTTTAATC CATCATAAGT ATGCACCATC 1260 ACATTAATCT TCCAAAAATG TATTTTATCA AGTCACTTCC TTGCTCCAGT ATAGGACACA 1320 ATGGCTCCCC ACTGCTACAA GCTGATGTCC AGACTCTCAA ACCAGGACTT TAAGTCCCAC 1380 ACTCAATACT ATCAATATCA CTGCCTCCTG ATCAAAACTC ACCTCCCCTG TACTTTACTC 1440 CTCTGCAGGC TTCCTAAGGT CTATCCAGTT GGTCTGACTA ACAAAACCAT ACCTTTGCTG 1500 AGGTGCCATA GAATATTTTA TTTAATTAAT TTATTTAGCT AGTTATTTTG AGGCAGGGTC 1560 TTGGTCTGTC ACCCAGACTG GAGTGCAGAG GTGCAATCAT GGCTCACTGC AGCCTCAGCC 1620 TCCTGGGCTC AAGGGATCCT CCCACCTCAG CCTCTTGAGT AGCTGGGACT ACAGGCATGC 1680 ACCACCATGC CTGGTTAATT ATTTTATTTT TGTAGAGATG GAGTCTTGCT ATGTTGCCTA 1740 GGATGGTCTT GAACTACTGG GCTTAAGCAA CCCTCCCTCC TCAGCCTCAC AAAGTGCTGG 1800 GATTATAGCC TTGAGCCACA ATGCCCGGCC TAGAATATTT TAAATTATTT TAAAACAGTT 1860 CATCAAGTTT AAGAGGAGAA ATTTATTCAA ATGTTTTGAA TTAGTTTTAC AAACTCTATA 1920 AAAAGGGCTC TTAAAATGTG TGATCTAAAT TCTGACTCAA TCCTCTTGTT TGTTGGCCCT 1980 ATCTATAAAT TATCAGATCC CCAATGTCCA TGTTTCAAAG ATTCTACTTT TTCAAGGAAA 2040 TCTTCTAAGA GGATACTTTG ACATCTTAGC AAGCTGTATT TGTCTAAATA GAGTCCACAG 2100
|