EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS022-01045

Organism

Homo sapiens

Tissue/cell

CD4+

Coordinate

chr1:156106230-156106710

Target genes

Number: 34
Name	Ensembl ID

RP11	ENSG00000234937
GON4L	ENSG00000116580
SYT11	ENSG00000132718
U4	ENSG00000201614
RIT1	ENSG00000143622
SNORA42	ENSG00000207475
SCARNA4	ENSG00000252808
KIAA0907	ENSG00000132680
RXFP4	ENSG00000173080
ARHGEF2	ENSG00000116584
SSR2	ENSG00000163479
RAB25	ENSG00000132698
AL355388.1	ENSG00000222611
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SEMA4A	ENSG00000196189
SNORA26	ENSG00000252236
SLC25A44	ENSG00000160785
PMF1	ENSG00000160783
BGLAP	ENSG00000242252
PAQR6	ENSG00000160781
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
VHLL	ENSG00000189030
AL589685.1	ENSG00000228155
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
RHBG	ENSG00000132677
MIR9	ENSG00000207933
C1orf61	ENSG00000125462
Y	ENSG00000206651
MEF2D	ENSG00000116604
snoU13	ENSG00000238843

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_01581	chr1:156103382-156109472	Aorta
SE_05929	chr1:156105763-156107313	Brain_Hippocampus_Middle
SE_54528	chr1:156106091-156111988	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I156135

chr1

156105764

156107313

Enhancer Sequence

GGCTCCTGCT CAGGGTCTAA GGGGATACAG CTGCATCAGG GAGAGAGTGG CAAGACAGAA 60
GGATGGCATG TGGAGAGAGG AACATCCTTG CCCTCAGAGG GTGGACCAGG GTGAGCCTGT 120
ATATCTCCTC CACACTCTGG TTCCAGGCCT GGCTCCTGGA CTCTTTGGCT GTGAGACCTT 180
GAGCAGGTTA TTTAACCTCT CAGAGCATCA GTTTCCTCAT CTGTAAAATG GGGATGAATA 240
CTGATCCCTA AGTCTTTGAG TTGTCAGGAA GATGAAAGAT AAGGTATCCG TGTGCCTGGT 300
GCTGCGTATG TGTCCACAGA TCATGGCTAT TATCCCCGGG GGAAGGGCAG TGACAGGGGT 360
GTGTGTAGAT GGAAGGAGAG GCCTCAATTG CAGGCAGGCA GAGGGCTGGG CCTTTGAGCA 420
AGATACACCC AAGAGCCTGG GTGAGCCTCC CCGACCTTCC TCTTCCCTAT CTTCCCGGCA 480