EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-00793

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr1:179899100-179901330

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arntl	MA0603.1	chr1:179901280-179901290	GCACGTGACC	-	6.02
IRF1	MA0050.2	chr1:179900919-179900940	AAAAAAAAAAAGAAAGAAAAG	-	6.41
NR2F1	MA0017.2	chr1:179901281-179901294	CACGTGACCTTTG	-	6.3
NR2F1	MA0017.2	chr1:179899597-179899610	CCTTTGACCTTTG	-	7.22

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I179929	chr1	179898684	179899831
GH01I179930	chr1	179900101	179900330

Enhancer Sequence

AAAAAAAGGA AATTGAACTA GATGATATTT AAAGTCTCTG TCAATGCTGA TTCTATAAAA 60
TTGGCAAAGT TTGTAATAGC TTAATATAAT GTAAAGCCCA GAATATTTTG CTTGATATAG 120
CCTCTGAAAG AGAATCACTT ATAGTCCATG ATCTGTCCAA CATTCAACAG GCATCTCAAA 180
CTGTGTTGGA GTAGTGTAAT ACTTGCTGCT TGAAATATAA GATCTGAGTG AGCAAATTCC 240
AATGAAATCT TTTCCTTTGG AAATAGTTCC AAAGAATTAA GCTTTCTATT GTTAACAGGC 300
AAGTTCCAAA GACCAAAGGT TTGCTCCTCT GAAATATTTT CATTAGCCTT GAATAAGCAA 360
GTTGGCAGAG AGAGGGAACG AAGTACTTTT GTGTTCAGAA AATGCAGCCA ACTTCCTATC 420
TCTGGCTTTA CCTCTAAGTT TTGTTATTGA ATCAGCAGTT CTGTTTTTTT AAGTCATCTG 480
GTTATTCCCA AGGTGGCCCT TTGACCTTTG CAGTTTGCCC AAAGGAGATC TACATGTATT 540
AGCTGGTTGG ACTATAGGTT AAGCTTAGAT TTAGCTCTAA GCAATGAACC CTTTGCCCTT 600
ATATCACCTG TTATCTCGTT CCTGCAGAAA AGGAACACAA ACATCCAAAT TTATAGCAGT 660
CTCAACATCT GCCTTAAAGC TTTTGTAAAG TATACAGGGA GTAATGTAAA TATGTGCATG 720
CTAACATTAA TGTGAAATAA ACTCTAAGTA AACAAGAGGA ATGAATGGAT AAGGCTAATA 780
TAACTCTCAT AGCTACAGCC ATCTCCCATA ATTGGAAAGT TAAGTGCTTT AAAAAATTTG 840
TTTCAAATTT TAAACATAAT AATTTAAACA AAAAAATTAA AGTTTTAGTT TCATGGTTTC 900
TTCAAAGTAT CAATTCTCCT CAAAACAATA AAAACAGCCA ATGAAATTAA AATACATAAA 960
GAGTACCCGG TAAATAGAAA CGAATAAAGT AAAAAAGTAA GTTGAACAGG AGAAGTTTGG 1020
AAGTAAGGTG CTGGGATAAT CAACAAGCCT GGTAAGGTCC ATTTCTCAGA CAGTATGAGG 1080
TCATGCTGCA GATAGCAACA TATTTCTGGC GCCTTCCATC TGAGGTTCTT CAAGTGCATA 1140
GCTGATGTTA TCTTATAGCA AATATTATTA CCTCCATTTT ATAGGTGCAG AAACTAAGAT 1200
ACCAGGAGAT TAGATAACTT GCTTAAGCCT GCACAATGAG TCAGTGATAG AATCAGAAGT 1260
GTATTTCAGG AATCTAATCT TTTCTGTTTG AATCACTAGG TCAGCTTTCT AGATACCAAA 1320
AGACATGTAT GAATTTTTAT TAAAATTAAT AAATTGTAAA TTTTGTTAAT ATACTTAGAA 1380
AATGGATTAT CTTCTGTAAA CAATTCAGTG AAATATTTTT GTTGTAAGCC ATTGTTGCTT 1440
TTTGGGGGGA AAAATTTAAG AGGTGATTTA AAAATAAGTT CTCCCAGGTT TGAAAAGGTA 1500
TTCATGTGAG GTTTAAATTA TTTAGGAAAA CCCATTTTAA AGGTTGAGCA TGATGGTGAA 1560
CGCCTGTAAT CCCAGCACTT TGGGAGGCCG AGGCAGGCAG ATTGAGCTCA GGAGTTTGAG 1620
ACCAGCCTGG GCAACATAGT GAGACCCTGT CTCTACAAAA GGTTTAAAAG TTAGCCAGGT 1680
GTGGTGGTGT GCACCTGTAG TCTCAACTCC TCAAGAAGCT GAGGCAGGAG GATTGCTGGA 1740
GCCCAGTTCA AGGCTGCAGT AAGCTGTGAT TATGCCACTG CACTCCAGCC TAGGCGAAAG 1800
AGTGAGATTC TGTCTAAAAA AAAAAAAAAA GAAAGAAAAG AAATTTATTT TGGCAGAAGT 1860
ACAAGGATTG GCACATGTTG TTGTGGTCCT TGTAGACTTT CAATGACAGA TAAAGTAGTT 1920
CTATAATTAG GATAAAAATT AGAACAAGGG TAATAAAGAG TGAGTAATAT TTTGGAGTCT 1980
TATACAGGCA GGGGCCAGAC ACTTGGGCCA GCTGTCAGCT TCTCACGTTG CCTGCTTCTT 2040
ATTCCAAGAC TGAGCAGCAG AGTGGTTCCT GGTAAATTTT AATTTCAGAT AACCATCAGA 2100
TTGAGATGTC CGTTCAGGAG ACTTAGCCTT GAAAAACAAA TTTTTTTATA ACACCTGGAC 2160
CAGTTCCTTA CAGTAGGTGA GCACGTGACC TTTGATTAGA TTTGATTCAT AAAGTGCATG 2220
GGTCTTCCAG 2230