EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-00614

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr1:150179410-150180280

Target genes

Number: 7
Name	Ensembl ID

ANP32E	ENSG00000143401
U2	ENSG00000222222
APH1A	ENSG00000117362
MRPS21	ENSG00000187145
MCL1	ENSG00000143384
SNORA40	ENSG00000253047
ENSA	ENSG00000143420

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr1:150179717-150179732	TGAACTTTGACCCAT	-	6.05
Hnf4a	MA0114.3	chr1:150179715-150179731	ATTGAACTTTGACCCA	-	7.28
Nr2f6	MA0677.1	chr1:150179717-150179731	TGAACTTTGACCCA	-	6.15
Rxra	MA0512.2	chr1:150179717-150179731	TGAACTTTGACCCA	-	6.64

Enhancer Sequence

GCTGGTCTCT AACTCCTGGC CTCAAGTGAT CTGCCTGCCT CGGCCTCCCA AAGTGCTGGG 60
ATTACAGAAA ACAGCACCTG GCATGAGCCC CTGCACCTGG TCTAGAGTGT TTTTTTTCTG 120
AACAACTTCA TTAATTCAAA TAGTTTAGTT GAGCACAAAG ATTCCATCAT CTGCTTTTCT 180
CCCAGAATTT AAGCCACTTA TTTATTTACT ATCTTATTGT ATTTGTCGGA ACTTCTATAA 240
CAACGTCAAA TTATAGAGGC TGAGAGACTG AATAACAAAT GGACAATGGC AAGATCATAT 300
GAAAAATTGA ACTTTGACCC ATGATGTGCA ACACCTTGCC CAGGAGATCA ACCCTTTATC 360
TAAAATAAAC AACTCAGGAA GCCAGCCTGC TATAAGTCAG ACTTAGAGGA AGCCAGTTTG 420
CTATCTCTAG TGACAATCCA AGAAGCTAAA AAATAACTTC TGTAACAATT GGCCTAAAAT 480
GGCCAGGACT TGATCGATAA CTGACGGCGT CCAGAATTGT AGTCCCCATT TCCAGCATAG 540
GACCAACCAA GGAAAGCCAA ATATGCACCA CTAACCAATC ACATAAGACG CCCCACTTCT 600
GGTTAGCTCA CCTACAGCTT CCTCATGCCA ACAGCTTCCA ATCAGGGCTT TTTTCCTCTA 660
TAAAGCTTTC CCATTTCTCT GCCTGCCTTT GGGTCTCTGC CCAAATGCCA GTGCTGGTAG 720
CTGACTCCCT TGCTAAAGCA AGCTCAGAAT AAACAGCCGT TGCTTCTCTC ATTTGGTAGG 780
TCTTTTTTCT TTTAAAGACA GAGTCTCACT CTGTCACCCA GGAGTGCAGT GGTGCCATCT 840
CAACTCACTG TAACCTCTGC CTCCCCAGTT 870