Tag | Content |
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EnhancerAtlas ID | HS012-00244 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr1:43404540-43405780 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NKX2-3 | MA0672.1 | chr1:43405535-43405545 | ACCACTTGAA | + | 6.02 | TFAP2C | MA0524.2 | chr1:43404798-43404810 | CGCCCTAGGGCA | + | 6.07 |
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| Number of super-enhancer constituents: 44 | ID | Coordinate | Tissue/cell |
SE_01795 | chr1:43403674-43411142 | Aorta | SE_02447 | chr1:43405569-43410613 | Astrocytes | SE_06192 | chr1:43395065-43405505 | Brain_Hippocampus_Middle | SE_07319 | chr1:43403966-43405365 | Brain_Hippocampus_Middle_150 | SE_08269 | chr1:43400734-43404931 | Brain_Inferior_Temporal_Lobe | SE_10377 | chr1:43396392-43405534 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_12470 | chr1:43404286-43405407 | CD3 | SE_13825 | chr1:43401464-43405153 | CD34_Primary_RO01536 | SE_14471 | chr1:43395753-43414527 | CD4_Memory_Primary_7pool | SE_19657 | chr1:43396427-43405202 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20345 | chr1:43395492-43405550 | CD56 | SE_20799 | chr1:43396312-43405729 | CD8_Memory_7pool | SE_22754 | chr1:43395674-43405513 | CD8_primiary | SE_23189 | chr1:43399749-43406265 | Colon_Crypt_1 | SE_23904 | chr1:43401192-43405387 | Colon_Crypt_2 | SE_25177 | chr1:43399941-43405213 | Colon_Crypt_3 | SE_26580 | chr1:43395721-43413249 | Esophagus | SE_29267 | chr1:43400819-43410293 | Fetal_Intestine_Large | SE_31882 | chr1:43401274-43405435 | Gastric | SE_33837 | chr1:43401475-43412846 | HCC1954 | SE_34353 | chr1:43395339-43412997 | HCT-116 | SE_35049 | chr1:43400682-43411164 | HeLa | SE_36013 | chr1:43400628-43405505 | HMEC | SE_36013 | chr1:43405529-43411011 | HMEC | SE_37191 | chr1:43404622-43414101 | HSMMtube | SE_38794 | chr1:43405440-43410875 | HUVEC | SE_39883 | chr1:43397369-43405479 | K562 | SE_41620 | chr1:43403637-43405395 | LNCaP | SE_42796 | chr1:43401554-43405089 | Lung | SE_42796 | chr1:43405575-43411121 | Lung | SE_50202 | chr1:43396219-43406255 | Sigmoid_Colon | SE_54088 | chr1:43400594-43405374 | Spleen | SE_55821 | chr1:43399761-43405450 | u87 | SE_55821 | chr1:43405505-43410178 | u87 | SE_57045 | chr1:43396858-43405413 | VACO_400 | SE_57045 | chr1:43405486-43406260 | VACO_400 | SE_58269 | chr1:43404530-43404954 | VACO_9m | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64340 | chr1:43397259-43405516 | NHEK | SE_67781 | chr1:43399761-43405450 | u87 | SE_67781 | chr1:43405505-43410178 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I042929 | chr1 | 43395541 | 43414526 |
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Enhancer Sequence | TGCCCCGTTT GCTCTCACAG CACCTTGAAG CCCTCTGTTA GTGACACTCT GGCTTTCTCC 60 AAGGGGTCTC TCCCACTGCT GTGGAGACAG GGCCTGGCTC AGACTGTGTC TCAGGCAGCT 120 CCCTGAGGGC CAGCATGTGC CTGCTGTGTT CACAGCTATA CTTCTCTCTC CTTACTGTCT 180 AGGACCGCAT CTGGCACAGC GTGGATGCTC AGGAAGTCCT GGCTGAATGA AAGGGTTGGC 240 CAGATGGAAT CTCTGTGTCG CCCTAGGGCA GGCCTTCAGC CTACGCGGGC ACAGGAGTCT 300 CTCTGCCCTG TTACTACACA TGGGCTCTGA GCCTCACTTT CATTTCTTCT TCTTGGGTCC 360 TTCTGTCCTC TCTTCACATG TTACATGTAT CACTTCTAAT CTGGCTCCTG GTTGGAAAAA 420 CTACAGCCAG CCTTGTGAGA AGTGTTTGTA AAGTACAAAA GTCAACAGAC CAAGTGTCTG 480 GGTGCTTGCC CAAGAAACAC CGCTAGATTT CAGCGTTCTC AGTTCTGGCC ACTCACATCT 540 CCAGCTTCGG TCTGCTGGGG CTGGTTCCTG AAGTGACCTT TGGACAGGTG ACCATACATG 600 GTCCTATGAA TGCAGTTTAC AGGCTCATCT GGGCCCTCTG TGCTGCTGAC CAGCCCCGTG 660 ATGCCCTGGT CAGAGGTTCT GCCCATATTC CATGACAGTT ATAACCTCTT GCCTATTTCT 720 GATTAGATGG GAGGCCCCGG GGATCACAGA AGTTCATCTC AGATTTGTCT ACATCTTCAG 780 AAGTCTCTCA GTCCCTGGCT GGGCATGGTG GCTCATACCT GTAATCCCAG CACTTTGGGA 840 GGCCAAGGCA GGTGGATCGC CTGAGGTCAG GAGTTTGAGA CCAGCCTCAC CAACCTGGTG 900 AAACCCCATC TCTACTAAAA ACACAAAAAT TAGCTGGGCG TGGTGGTACA CACCTGTACC 960 AGTAGCCCAG CTACTTGGAA AGCTGAGGCA CGAGAACCAC TTGAACCCAG GAAGCGGAGG 1020 TTGCAGTGAG CCAAGATCAT GCCACTGTAC TCTGGCCTGG GCAGCAGAGC AAGACTCCGT 1080 CTCAAAAAAA AAAAAAAAAA AAAAGGTATC TCAGTCCCTC CTGGCCAAAG GCAGCCCCTC 1140 CCTTCTGCTC CGACACCACC CTCCCTCCTG GAAGACCTCC GCCCTCACTT CCTTATCTTC 1200 ACCCTCTCCT GCTGATTCCT TCCAACATGT TTAAAAATAA 1240
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