Tag | Content |
---|
EnhancerAtlas ID | HS003-03237 |
Organism | Homo sapiens |
Tissue/cell | A549 |
Coordinate | chr1:200872860-200876960 |
SNPs | Number: 4 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr1:200875430-200875445 | GAGGTCAGGAGTTCA | + | 6.22 | PLAG1 | MA0163.1 | chr1:200872997-200873011 | CCCCCTTGGGCTCC | - | 6.39 | TCF7L2 | MA0523.1 | chr1:200874195-200874209 | AAAGATCAAAGGCA | + | 7.73 |
|
| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_23181 | chr1:200873416-200874006 | Colon_Crypt_1 | SE_23181 | chr1:200874081-200874690 | Colon_Crypt_1 | SE_23181 | chr1:200874811-200875442 | Colon_Crypt_1 | SE_23181 | chr1:200875626-200878812 | Colon_Crypt_1 | SE_24573 | chr1:200876333-200878783 | Colon_Crypt_2 | SE_25202 | chr1:200875656-200878870 | Colon_Crypt_3 | SE_27435 | chr1:200873387-200874956 | Esophagus | SE_27435 | chr1:200875065-200878791 | Esophagus | SE_28769 | chr1:200876016-200879782 | Fetal_Intestine_Large | SE_33981 | chr1:200873398-200878744 | HCC1954 | SE_50836 | chr1:200873411-200875646 | Sigmoid_Colon | SE_50836 | chr1:200875691-200878781 | Sigmoid_Colon | SE_52641 | chr1:200873442-200875476 | Small_Intestine | SE_52641 | chr1:200875601-200878779 | Small_Intestine |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 200873042 | 200873235 | chr1 | 200874896 | 200875384 |
|
| Number: 4 | ID | Chromosome | Start | End |
GH01I200904 | chr1 | 200873417 | 200874006 | GH01I200905 | chr1 | 200874082 | 200874690 | GH01I200906 | chr1 | 200874781 | 200875150 | GH01I200907 | chr1 | 200876801 | 200876990 |
|
Enhancer Sequence | GGCGGAGGTT GCGGTGAGCC GAGATTGCAC CATTGCACTC CAGCCTGGTG ACAAGAGCGA 60 AACTCTGTCT CAAAAAAAAA AAAAAAAAAA AGGGAAAAAA GCAAACAACC CAAAAACCGA 120 AATAAAAAAC CACCCTGCCC CCTTGGGCTC CATACAAGGG TAATTTAGTT TGGGAAAGTA 180 ACTGCTAGGT GAGAGTCATC AGCCATACTT TGCAGTGGCA GGGAGCAGTC AGGTGTTGAG 240 CTCATTTACT AGAGTGAACC GCATGAGGGC CACCCAGCAC CCACCTGTGC AATGTAATAG 300 GCACTCTGGA TGCATCTGTT GATCAACAAC ACCAGCCATT AGCCACATCC TCATAACATT 360 TTTTTTTTTT TTTTGAGACG GAGTCTTGCT CTCTCATCCA GGCTGGAGTG CAGTGGAGCC 420 ATCTCAGCTC ACTGCAACCT CCACCTACCG GGTTTAAGCG ATTCTCCTGC CTCAGCCTCC 480 TGAGTAGCTG GGACTGCAGA TGCGTGCTGC CACGCCCAGC TAATTTTTGT ATTTTTAGTA 540 GAGATGGGGT TTCACCAAAT TGTCCAAGCT AGTCTCGAAC TCCTGACCTC AAGGGATCCT 600 CCCGCCTTGG CCTCCCAAGT GGTGGGATTA CAGGCGTGAG CCACTGCGCC TGGCCGCTCA 660 TAGCATTTCT GAGATGGTGG AAGTGTTCTG TATCTGTGCT GTCCAATACA GTAGCCACTC 720 GCTGCATGTG GCTATGGAGC ATTTGAACTG TGCCTAGTGT GACTGAGGAA CTGACTTTAT 780 TTAGTTTTAA TGAAAATAGC CACATGCGGC TAGTGGCAAC TGTGTTGGAC AGCATAGCCT 840 TGGGGGAAGC TCAGCATTTG TGAGTAAAAT CTCCACCGTT ACCCCTCTGT CTGGGGTGTC 900 CTGCGATGCT GCTGCGGGGC AGGGGAACGC TGAGCTAGGG CAGGGTTGGG ACAGTTGCTG 960 AGATAGTGAG CAGCTCTCAG AAACCTGAAT CTTTTTTTTT TTTTTTCCAA TCTTTTTAGA 1020 GACAGGGTCT TGTTCTGTTG CTCAGGCTGG AGTGCAGTAG TGTGATCATA CCTCACTGCA 1080 GCCTTGAACT CCTGGGCTCA AGTGATCTTC CTTCCTCAGC CTCTAGTAGC TGGGACTACA 1140 GTCATGTGCC ACCACACCCA GCAAATTAAA ACAAAACAAA ACAAAAAAAC TATTTTAGAG 1200 ATGGGATCTT GCTATATTGC CCAGGCTGGT CTCAAACTCC TGGTCTTAAG CAAACCTCCT 1260 GCCTCAGCCT CTGGAGTAAC TAAGATTATA GGTGTGCCTG GCCCAATGAA AATCTTTATT 1320 CCTAAGGTTT TTATAAAAGA TCAAAGGCAG GAGACCAGAA TTCAGTAAGA GGGGGTCTCT 1380 TTAATTGAAC CCTAAAGCAA AGGCTACTTG TGAGCCAAGC AAAGCATGGG CTGGCTGGCT 1440 ACTCAGGAGT CAAGCCCAGC TCCTGGTACC GTATGTCCTA GAAATCTACT GCCTGCTCTG 1500 GGTAAAGATT TTTTCATTAA ATTGCGGAGC AGGCTGAGCA TGTTGGCTCA AGCTTGTAAT 1560 CCCAGCACTT TGGGAGGCCA AGGCAGGAGG ATCTCTTGGG CCCAGGAGTA TGAGACCTGC 1620 CTGGACCACA CAGGGAGACC CTGTCTCTAC AAATAACTAA AATAAAAAAA TTGGATAGGC 1680 ATGGTTGTGG ACACCTATAG TCCCAGCTAC TCAGGAGTCT GAGGTGGGAG ATTGATTGAG 1740 CTCAGGAGGT CAAGGCTGCA GTGAGCTGTG ATCGGGCCAC TGCACTCCAG CCTAGGCAAC 1800 ATTGTAACAA CCCATCTTTA AAAAGATGGG TTAAACCTTT GTGGAGCAAA GGTTAACAAA 1860 CTTTTCCATA AAGAGCCAGA CAGTACATAT TTTAGTCTTT GTAGGCTCTT TGGTCTTTAT 1920 CACAACTGTT CAACTCTGCT ACTTCAGTGC TAAAACAGCC AGACATTACA TAAACAAATT 1980 CATAGCCGTG TTCCAATAAA CATTTATTTA CAAAAGCAGC TATTGAACTG GATTTGACCC 2040 CTGGGCCATA GTTTGCTAAC CTCTGTTGTA AGGGATTTCA AGATGGTTGG AACTTTTTAC 2100 TTTTTTTGAA ACTTCCTGGG CAATGCCCAT GCATTTGAGA TGCAAGCTCA CAGGGGAGAG 2160 CCCATAAAGG GTTGTGGTTA AGAGCAGACT CCAGTCAGAC TGTCTGGGTG TGAATTCTGA 2220 CTCAACCACC TTTGTTGAAT GTATAACCTA AACCACGTTA CTCAACTCCT CTGAGACGTG 2280 GTTTCCTCAA CTGTCACTTG CAGGTGATAA TATCTACCTT ACGTGGTTGT TATGAGAATT 2340 ACCTGAATTA ATATATATAA AGTGCTGTAT TTAGAAATGT ATTGGCACAG TAGAAACATT 2400 AGCAATTATT ACTTTTTCCT CATCTTCATT CTCAAACACA GTTGAAAATG TTTCGTGAGT 2460 TCCATCCAGG TCACTTTAGG CTTATTCTCA AGATCTGAAG GCCTGGCCGG GTGTGGTGGC 2520 TCACGCCTGT GATCCCAGCA CTTTGGGAAG CCGAGGTGGG TGGATCACCT GAGGTCAGGA 2580 GTTCAAGACC AGCCTGGCCA ACCTGGCAAA ACCCCGTCTC TACTAAAAAT ACAAAAATTA 2640 GCCAGGCATA GTGGTGTGTG CCTGTAATCC CAGCTACTCG GGAGGCTGAG GCAGGAGAAT 2700 CGCTTGAACC TGGGAGGTGG AGGTTGCAGT GAGTCGAGAT CACACCACTG CTCTCCAGCC 2760 TGGGTAAGAG AATGAGACTC CATCTCAAAA AAAAAAAAAA AAAAAATCTG AAGGCTTAAG 2820 TTTCTTCAAA AGCAATAGCA CAAATGAGTT CCCTCTGATT TCTTAGGTAA AAAGTGCTGC 2880 TATACCATGA AGTAAAGTCA CACTGAATTT CCTTCAGGTG ACTTGCCAGA TCACCAACTG 2940 AAGAAACTTC CCTGGGGCCA GCTGGCCAGA CCTTATCTTA AATTCAAATT CCTACCTTGC 3000 GTTCCTCTTG TTGTTGGTAA CACAGGAGGT CTCACATTGG GATCTTTGAA TTGTGTTTGT 3060 GATGTGAGAT GATTATACAA AAGTTAGAGT GAAATTCCCT TTTTTTTATT TGAGACAGGG 3120 TCTCACTCTG TTGCCCAGGC TGGAGTGCGG TGGTGTGATC ACGGCTCACT GCAGCCTCGA 3180 CCTCCCAGGC TCAAGTGATC TTCCCATCTC AGGTTCCCAA GTAGCTGGGA CTACAGGCAT 3240 GCACCATCAT GCCTGGCTAA TTTTCGTATT TTTTGTAGAG ACCAGATTTC ACCATCTTGC 3300 CCAGGTGGGT CTTGAACTCC TGGGCTTAAG CCATCTGCTG CCTTGGCCTC CTAAAATGCT 3360 GGGATTACAG GCATGAACCA CCGCGCCTGG CCATGAAATT CTTTTTATCC TAAGGGCCTT 3420 CCAAAATGAC CCTTTGTCTT TCCTTTCCAC TACCAAGAAG CCCTGCCAGA GGACACCCTT 3480 TTTCTTTTTT TTTGACAGGT GGGGAAACTG AGGTCTAGAG CATTGAAATG GTTTATTCAA 3540 GGTTGCATAG CTAGTATCAG AGTCAGGATT AAAATCAGGT TTCCTGTCTC CTAGCTCTGC 3600 CTTCTATTTT TTTCTACTTC CATGTAGTAA GTTTACAGCC AGGCCAGGCA CAGTGGCTCA 3660 TGCCTATAAT CCCAGCACTT TGGGAGGCCA AGGTGGGATG ATCACTTGAG CCTAGGAGTT 3720 CAAGATCAGC CTGGGCAAGA CAGCAAGACC TCTTCTCTAC AAAAAAAATA AAATAATTTA 3780 GCTGGGTGTG CTGGCATGCC CCTGTGGTCT CAGCTACTTG TGAGGCTGAG GTGGGAGGAT 3840 CCCTTGAGCC TGGGAGGTCA AGGCTGCAGT GAGCCATGAT CACACCACTG CACTCCAGCC 3900 TGGGCCACAG GGTAAGACCC TGTCTCTTAA AAAAAAAAAA AATCACTCCC AATGTGTATT 3960 TAGCACACAG AGGGTATTTC CTCATAACTG ATGCTGTCCT GGGGGAGTGA TCAGGCCTGA 4020 GCTGCTCAGC ACTGCTGGTT ACTCATATCT GTTTGTTCAT TTCTTCACTT CCTTCTCTTC 4080 TCTCCCCTTT GTCTTTCGCA 4100
|