EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-02520

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr1:156505040-156506930

Target genes

Number: 36
Name	Ensembl ID

RIT1	ENSG00000143622
KIAA0907	ENSG00000132680
ARHGEF2	ENSG00000116584
SSR2	ENSG00000163479
UBQLN4	ENSG00000160803
LAMTOR2	ENSG00000116586
LMNA	ENSG00000160789
SLC25A44	ENSG00000160785
RP11	ENSG00000260238
PMF1	ENSG00000160783
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
VHLL	ENSG00000189030
AL589685.1	ENSG00000228155
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
RHBG	ENSG00000132677
C1orf61	ENSG00000125462
Y	ENSG00000206651
MEF2D	ENSG00000116604
snoU13	ENSG00000238843
IQGAP3	ENSG00000183856
TTC24	ENSG00000187862
APOA1BP	ENSG00000163382
GPATCH4	ENSG00000160818
HAPLN2	ENSG00000132702
BCAN	ENSG00000132692
NES	ENSG00000132688
CRABP2	ENSG00000143320
RRNAD1	ENSG00000143303
ISG20L2	ENSG00000143319
MRPL24	ENSG00000143314
PRCC	ENSG00000143294
HDGF	ENSG00000143321
MIR765	ENSG00000211581

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:156506865-156506883	CCTCCCTGCCTTCCTCCC	-	7.12
Nkx2-5(var.2)	MA0503.1	chr1:156505105-156505116	CTTGAGTGCCT	-	6.14
ZNF263	MA0528.1	chr1:156506268-156506289	GGAGAAGGGGAGAGAGGATGG	+	6.37
ZNF263	MA0528.1	chr1:156506861-156506882	TCTCCCTCCCTGCCTTCCTCC	-	7.1

Enhancer Sequence

TGGGGACAAA GAAACAGGTG CGCGTGGCTG TGCCTCTGCC CATCTCTCTC TGCCAGAGAT 60
AAGAGCTTGA GTGCCTGGCT GTCTCTTCTC CCCCAGGCTC AGCCACTCCA GAGTAGAGCT 120
CAAGCACTGT CCCTCCACTA GCCATAGCCA GCTCCCTGCT GCCTTCCTCC AAACGTCTCT 180
GGGCCTTGTC CCTTCCTCCT GCCTTATGTC AGTAGTCAGG ACCAGGGCCC TATCATCTAC 240
TAAATCTCTC ACACAGCCTC CAACCTGGCT CGAGAACCTC TTCTTTGAGA CTCTCTGGGT 300
CCCCTGCAGA GCACCCCAGC TCACCATAGC CATCCCCCAT CCCCCAGAGG CACCATTAAC 360
CTAAAGCTTG GGTATCTGAC ACTCACAGCC AAAACCCTGT CCTAGGACAG CCTAGGTGGC 420
TCCGAGGTAG TCAACCTTGT CAGCTGTCAC AGAGCATCTG TGAGTGGCCT AGTCTGGGCT 480
AGAGGTAGGG CCCCAAGGAG ATCAGTGAGC CGGGAGGAGA AGCTCCAGTT TGGACTCCAC 540
CACCAACCAG AGATATTATC TTAGACTATT TCCTTCTCCT TTGTAAGTCT GTCCCCTGGT 600
CTAGAAAATG GGAATGATCA TTCTTGCCTT CTCTTCTCAC AGGGCTTTTT GAGGATCAAG 660
TGAAATTATG TCTGCGAGAG TAACGTATAA TGGTAGAGTA CTATTCAAAT GTGCTAGACT 720
GTATTATCAT TATTATTCCT ATTATGGATG TGCCACCTAC AAATGTAATT AAATTCATTT 780
AAAAGCAATT TCCACTCCTA GGGTACCAGA GACAGAAGTT TACAGCTCAT TGTGTACTTT 840
ACTTTCTTAA GCCTAGAACA ATCTTTTCTT ACTCCTAATT GTAAACTCTT AATCCGGTTC 900
TCCAGGTTTG GGGAGCAGGG TTATAAACTC TGTGGGTTCC CCCTTTCAAC ATCCTCATCT 960
TGCCCTGGGC ATTCCAGCCT GGGCAATGGA GTGAGACCCT GTCTTAAAAA TAATAATAAT 1020
AAAAAATAAA GAAAAACAAA CAAAAAAAGA ATGAAAGCCT GTCATTTTCG ACAACATAGA 1080
TGAACGTAGA GGTTCGTGTT AAGTGACATA CATAAGCCAA ACACAGAAGG ACAAATACTG 1140
CATAATCTCA CTCATATGTG GAATCTTAAA AAGGTGATTT CACAGGAGTA GAGAGTAGAA 1200
TGGTGGTTAC CGGAGTCTGG GGAGGGTAGG AGAAGGGGAG AGAGGATGGG GAGAGGTTGG 1260
TCAATGGGTA CAAAGTTACA TCCAGGTAGA AAGAATAAGT TCTGGTGCTC TATTGCACAG 1320
AAGGTGACTA TAGTTGATAA TAATGTGTTG TATATCTCAA AATAGCTAGA AGGATTTTGA 1380
ATGTTCTCAC CAAAAAGAAA TAAATGTTTG AGGTAATAGA TATGCTAATT ACCCTGATTT 1440
GATCATTCAT TGCACAATGT ATACACGTAT CAAAACATCA CACTATACCC TATGAATATG 1500
TACAATTATC ATGTGTCAAA AATAAATGTA GAAAACCAAA CGTATTGACT AAATTTTAAG 1560
AAAAGAGAGA ACTATAAAGT ACTTTATGGG CTTAAAATAT TTATTTTTGA TATTGGGAAC 1620
TGAAGAGTCC CATTTTCTCC TCATTTGCTC TTAGCTAATA AAGTGTCCCT GAGATCATTT 1680
TAGGGTCCCT CCTCTGGTTC CACTGACATC CTACCAGGCC ACACACAGAC TTGCACGCCG 1740
TCTCTCAGCT CAGCTCTCTA GCAGGAGCTT CGAGCATTCC CCACATCTCT TCAGGAACCC 1800
CTCTGAGTAC CCCTGGCTCC ATCTCCCTCC CTGCCTTCCT CCCTGCAGGA CTATCACCCT 1860
GCTCTGCTCC CCATGGTGGC CTGGCCCTCT 1890