Tag | Content |
---|
EnhancerAtlas ID | HS003-01047 |
Organism | Homo sapiens |
Tissue/cell | A549 |
Coordinate | chr1:39638920-39641540 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:39639015-39639036 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 | SCRT1 | MA0743.1 | chr1:39639172-39639187 | TACCACTTGTTGCAT | - | 6.24 | SCRT2 | MA0744.1 | chr1:39639174-39639187 | CCACTTGTTGCAT | - | 6.17 |
|
| Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
SE_02052 | chr1:39638937-39639907 | Aorta | SE_02052 | chr1:39640140-39640901 | Aorta | SE_03650 | chr1:39639166-39640185 | Brain_Angular_Gyrus | SE_06399 | chr1:39637613-39640550 | Brain_Hippocampus_Middle | SE_08441 | chr1:39637734-39640518 | Brain_Inferior_Temporal_Lobe | SE_25799 | chr1:39637538-39641258 | Duodenum_Smooth_Muscle | SE_30410 | chr1:39638991-39639922 | Fetal_Muscle | SE_35822 | chr1:39638924-39640446 | HMEC | SE_36947 | chr1:39633308-39647246 | HSMMtube | SE_42256 | chr1:39639028-39639775 | Lung | SE_42256 | chr1:39640175-39640856 | Lung | SE_45317 | chr1:39639021-39639757 | NHLF | SE_45768 | chr1:39638815-39640887 | Osteoblasts | SE_47164 | chr1:39633447-39641582 | Panc1 | SE_51765 | chr1:39638954-39640928 | Skeletal_Muscle_Myoblast | SE_54583 | chr1:39637379-39641344 | Stomach_Smooth_Muscle | SE_63563 | chr1:39638937-39641041 | HSMM | SE_64597 | chr1:39639063-39639853 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I039171 | chr1 | 39637660 | 39641468 |
|
Enhancer Sequence | GGAATCACTT GAACCTGGGA GGCGGAGGTT GCGGTGACCA GAGATTGCAC CACTGAACTC 60 CAGCCTGGTG ATGGAGCCAG ACTCCATCTC AAAAAAAAAA AAAAAAGAAA GAAAGAAAGA 120 AAAAGCACTG GAAACAATTG CTAGATCTTA AACATTCACT TAGGAAATGC CAAACCTGTA 180 GATTTGGAGT AAGAAGCAGA GAGGCTAGTG AGAGAGTTCA GGGTTTAGGC CTGATTTCTA 240 TCCTCTTCCA CCTACCACTT GTTGCATTTC CTTCACTGTC AGAATTTGAT TGTTCTGTGT 300 CTGTATCTTC AGATGTGTTT TTCCTAGTGT ATTTGAAAAA CTGTTGAACA GTCCCCTCTG 360 GGCAGGGAGG GAAGAGGGTT AGACAATCAG GAGTAGAGAC TCTGTTATTT CTCTCTCCAG 420 ACCTAGACCC TGGAGTTAAC TGAAGGTCCA GAGTTACTGA GGGGCGGCTG TGTTTGTTTT 480 TCAGTAGGCT GGCTTTACTG AGTGGGATAC AAGAGCCCAA AGCACAGGCC ATTCCCAGAA 540 GCCTAACATT TTCATATTTC TTTCTCTGCC AAAGAATCTT TGGTTAGGGT TAAGAATAAC 600 TAGTCTGTCT GTGGAAATAC CAAGGCCTTT TGTTTGCCAG AAGAAAAGCG CTTTTGATTA 660 AGGCTGCCTT TTCTCTCTCT CTTTTTTTTT TCTTAAGCTG TTGTGGGAAG ACTTCAGAGC 720 CTCTGAAGGT GCCGTATTTA AGGGGTGTAG GGGAAGGAAT GATAGCTAAA TAGAACTAAG 780 GGAGACTTAA TCGTGCTTTA CCGCACATTT GTGCAGAGAT TAACAACAGC AACAAAATCT 840 ACCCAGTTTT TGGTCATTGC TTCTACTAGC CTTTCTTTCT TCCTGTCTTT TATGAAATCT 900 ACCCAAAACA GTAGTTCCCA AAGGACCTGC TGTACTGATC TGACCTTGAA TCATACTCTA 960 TCACTTAGTG TGATTTGGGG CATGTTACTT AACTTTTCTC TTTAGGCTAG AGTTTTGCAA 1020 CTATAAAATG GGGATTATAG TAGACCATTT TCATAGGGTT ATAATGAGAA TTGAATGAGT 1080 TAATATGTGG AAAATACTTA GGACAGTGCC TGGCACATAG TAAGAGCTTA TCCCAGTAAA 1140 TATTACTGCT ACTGTGTATG GCAAATGCTG AGTGTAGCTT TATTTTTTCG ATTAGTAATT 1200 CCAAATGTGG CTTTCTAGGG TTAGCAAAGT CAGGGCTTTT TTTTTATAGA ATGAAAAGGA 1260 AGCAGACATT CCCATTAGGC ATTAACTTTT TATCAGTCAG AGGCAAAGGG AAAGATTTAT 1320 TCTCTGTGTG GACGCATCAT AGAGGCTCAG TGTCTTCTTA GTTGAATGTC AACAAGGGAA 1380 TCAATTTCAT CATGAAGAAC TACTCTTTGG CAAAAGCAAG GGCGAGGGTT GGGTTGTGTA 1440 CTTTCGTAGT CTTTGTCTGA GAGTAGTGAT GTTTCTTGTG CCCCAGGAAA GCTTGAACCA 1500 AGGTATAGAG AAAGGGCCCC TGATCCTCCA AATTTACAGT AGTAAGAGAA GCAAGAAATA 1560 TCTTAGTAGG AAAAGGGGAA ACCCTCAGGG CTGGGTCTCG TCCCAGTGAC TCTACTACCA 1620 GGTCTGGAGA ATGTCACTAG TGGAGGCTCT GGGCAAGTGC CTGGCCACTG CATTTCCCTG 1680 GCCATAGTAA GAGATGTGCA GAATGACCTG CCCTAAGTCT CTGGGCTGTT TGTTTTATAA 1740 ACTGCTACCT TCTTCCCCAA ATTGCTGGGA GTGGCTAAGG AAGTGGCACA GAAATTTAGA 1800 TTTTTGTGTC TTTCTTGCCC TTTTCTGTAT TGTCTTTAGT TTTTAGAAGG ACTTTCTTGG 1860 CTGCCTTCTC CCTCCCCCAC CTTGCTCCAT CCTCTCTTGC AAAGTAAAAT CTCATCTTCC 1920 TGCAGGAGGT TAGGTTGTAA AGTTTACACA TAAAGTGAGG ATTCCAAATA ATCAAAATTA 1980 TCATGGAAAA TATCTCAAAT GACCCAGAAA TTAAAGTATA TAAACATGGT TTTGTGTATA 2040 TGCCAGAACA AAGTTGGAAT ACCATATGAA ATAGTTGGCC TGTAATTAGG AGACATTTTA 2100 TATGAAAAAA TAAGTATTCT CAAAAACTAG AATCATGTAC AGCATTCAGA ATGCTCACAA 2160 TGTGAAGAGG CACACCGGAC TTAGACATGC TAAAGTCTCA GATTCAAGTC CTCTCATCTC 2220 ATGCTCATGT TCATCCTGGT AAATAACTTC ACTTTGGTGT AAAACCTCAT TGAGTGGAAT 2280 TGTGAGCAAA CTTTTGTACT GTTTATTTTT CTCTTCCTGG TCAAGTTTGC ATAGTTAAAT 2340 GCAAGTATGT TGTGATTGTA TTTTATCCTT CTTTTCTGCT TTCTGTTTTT CTAATTTCTT 2400 CTTCCCTTTT AAAAATCCTC ACTGCCGGGG GCAGTGGCTC ACACCTATAA TCCCAGCACT 2460 TTGGGAGGCT GAGGCAGGCG AATCACTTGA GGCCAGGAGT TTGAAACCAG CCTGGCCAAC 2520 GTGGTGAAAG CCTCTCTCTA CTAAAAATAC AAAAATTAGC CGGGTGTGGC CAGGTGCAGT 2580 GGCTCACGCC TGTAATCCCA GCACTTTGGG AGGCCAAGGA 2620
|