EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-00817

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr1:28346200-28347010

Target genes

Number: 3
Name	Ensembl ID

RPA2	ENSG00000117748
AL512288.1	ENSG00000240750
EYA3	ENSG00000158161

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx3-2

MA0122.3

chr1:28346621-28346634

CAAACCACTTAAT

6.1

Enhancer Sequence

TACCTTCTCC ATATCCTTTT TTTCTTTTTT TTGAGATGAG TATCACTCTT GTTGCCCAGG 60
CTAGAGTGCA ATGGTAGTCT CGGCTCACTG CAACCTCCGC CTCCCGGGTT CAAGAATCCT 120
CCTGCCTCAG TTTCCCAGGT AGCTGAGATT ACAGACATGC ACCACCAAGC CCGGCTAATG 180
CTGCATTTTT TTTAGTAGAG ATGGGTTTCA CCATGTTGGT CAGGGTGGTC TTGAACACCT 240
GACCTCAGGT GATCCACCCA CCTCAGCCTC CCAAAGTGCT GGGATTACAG GCATGAGCCA 300
CCACGCCCGG CTACTTCTCC ATAACTTAAT AATGGTGGGA GGTACAACTC AGTCATATCT 360
GATCTCTATG GGGGAAAATG TACTCTGATT GACAAGGTGG TTTTACAAAT CTAACAATTT 420
TCAAACCACT TAATGAATTG TACTGGAGGT AAAATGGTAG ACCTTAAAAA CAACTAGCCA 480
TAAACTCTTA TTATATCCCG GCTAGAAAGT TTAATGGCTT GATTAGCTAG TTGATAACTC 540
TGAGTTTTTA ACAAGTACTG TATTAAAATC ACAAATTTCT CTGAGCAATA GTTGGCTTTT 600
ATTATAGGGG AACTTGGTCT GCTGACCCAG AAAGTTCATA GGGCTTAATA ACACTTTTTT 660
CTCCAACTAA GCCAAATTAT TTCTAACATG TGCCACTCAT TCATTCAGCA AACCCATTAA 720
GTATATCAGG GTCAACTATG TGCCTAGAAA CCATTTCAGC CACTGAAGGA TAAAATAGTA 780
AGACAAAGTC CTGGCCCTCA AGGAGTTTAA 810