Tag | Content |
---|
EnhancerAtlas ID | HS003-00416 |
Organism | Homo sapiens |
Tissue/cell | A549 |
Coordinate | chr1:16513060-16517620 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:16514416-16514435 | TGCCGCCCTCTGGTGGCTG | - | 8.01 | FOSL1 | MA0477.1 | chr1:16514795-16514806 | GGTGACTCATG | + | 6.62 | JUND | MA0491.1 | chr1:16514795-16514806 | GGTGACTCATG | + | 6.02 | KLF4 | MA0039.3 | chr1:16515443-16515454 | CCACACCCTGC | + | 6.62 | POU2F2 | MA0507.1 | chr1:16517059-16517072 | TTATGCAAATCAA | - | 6.03 | Pou2f3 | MA0627.1 | chr1:16517057-16517073 | CTTTATGCAAATCAAC | + | 6.21 | TP63 | MA0525.2 | chr1:16514924-16514942 | AGCATGTTGGCACATGCC | + | 6.01 |
|
| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_23091 | chr1:16513017-16513608 | Colon_Crypt_1 | SE_23091 | chr1:16515057-16516232 | Colon_Crypt_1 | SE_23751 | chr1:16515130-16516087 | Colon_Crypt_2 | SE_24743 | chr1:16513042-16513547 | Colon_Crypt_3 | SE_24743 | chr1:16515648-16516115 | Colon_Crypt_3 | SE_26540 | chr1:16512848-16513779 | Esophagus | SE_26540 | chr1:16513910-16517815 | Esophagus | SE_28102 | chr1:16515172-16516184 | Fetal_Intestine | SE_29455 | chr1:16515096-16516063 | Fetal_Intestine_Large | SE_31527 | chr1:16515204-16516074 | Gastric | SE_34268 | chr1:16514127-16516193 | HCT-116 | SE_34628 | chr1:16512910-16513730 | HeLa | SE_34628 | chr1:16513819-16517068 | HeLa | SE_36144 | chr1:16514154-16516161 | HMEC | SE_47150 | chr1:16512880-16515228 | Panc1 | SE_50427 | chr1:16512935-16513663 | Sigmoid_Colon | SE_50427 | chr1:16514084-16516281 | Sigmoid_Colon | SE_52536 | chr1:16514970-16516287 | Small_Intestine | SE_56795 | chr1:16512885-16513659 | VACO_400 | SE_56795 | chr1:16513668-16515000 | VACO_400 | SE_64726 | chr1:16514111-16515805 | NHEK | SE_65472 | chr1:16516042-16517079 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 7 | Chromosome | Start | End |
chr1 | 16515354 | 16516020 | chr1 | 16514023 | 16516800 | chr1 | 16513107 | 16513257 | chr1 | 16516348 | 16517102 | chr1 | 16517329 | 16517466 | chr1 | 16514142 | 16514842 | chr1 | 16517106 | 16517195 |
|
| Number: 3 | ID | Chromosome | Start | End |
GH01I016186 | chr1 | 16512849 | 16513779 | GH01I016189 | chr1 | 16516243 | 16516615 | GH01I016187 | chr1 | 16513841 | 16516098 |
|
Enhancer Sequence | CTGGGATGAC AGGTGTGAGC CACTGTGCCC GGCCTGGGCA GAGCTCCTCC TGAGAGCCCG 60 TCTGAGTGGG CTCGGGTACA GCACTGGCAC ATCCTCCGTG TCTTCACTTC CAGCCTCTCA 120 AGCTGTTGTG AGAATCCTGG GGGCTGGGGA ACATGCTTAC ACTTTGAGCT GGAATCGCTG 180 CAGAGCTAGG GTCGGGGAAG TTGTGATAGT CAAGGGCTTC GGGGAGTAGG CCTAGGTCTG 240 GTGGGTCTGG TTTCAAAGAA GCTCTGCCTT TTACTTGCTG TGTGACTTCA GGCAAGTCAC 300 TTCTCCTCTC TGAGCTTCCC TTTCCTTCTT AGTAAAGTTT GGCTGAGTTG AACAGAACCT 360 GCTCCTAGCA GAGTTACAAG GATTAAAGGG CATAATTGGT GCCAATGGAG TGGTAAACAA 420 CACTCAGTGC ACAGTGGCGG TGATTTTTAT TGTCCCCTTA TTCAGTCAAG AACTTGGCAT 480 ATCCGGGGCA GTGGCTCACG CCTGTAATCC CAGCACTTTG GAATGCCGAG GTGGGTAGAT 540 CACCTGAGGT CAGGAGTACG AGACCAGCCT GGCCAACATG GCAAAAACCC ATCTCTGCTA 600 AAAATACAAA AATTAGCCTG GCATGGTGGT GCATGCCTGT AATCCCAGCT ACTCAGGAGG 660 CTGAGGAAAG AGAATCGCTT GAGCCTGGGA GGCGGAAGTT GCAGTGAGCT GAGATTGTGC 720 CACTGCACTC CAGCCTGGGT GACAGAGCGA GACTCTTAAA AAAAAAAAAA AAAAAAGGGA 780 GGCATGGGGG GCTAGGGAAG GGATAGCATT AGGAGAAATA CCTAATGTAA ATAGCGGGTT 840 GATGGGTGCA GCAAACCACC ATGGCACGTG TATACCTATG TAACAAACCT CCATGTTCAA 900 CACATGTATC CCAGAAATTA AAGTATAAAA AAAATTACAC CAATATAAAG AATGGATACA 960 TTATGTGAGT TACTGTGCCA TGTGATAATG AAGTTCAAAT TGTAAATACA ACCACTAACT 1020 ATTTCTGTGA TTCATATTTT TATATAAGAA AAATAAAAAG AAGAAGAAGA ACTTGACATG 1080 AAGGACTGGG ACATCATAGG ACCAAGGGGG TGGTCTCTGG AGCCTCTGAG CATGTTTCAG 1140 ACTTAGGAAC CCTCACAGCT GAGGCCAGGA CTGGCCATGT GCTCCTGTCT CCAGGGCTCT 1200 ATGCCCTCCC TTCCCTCTAC CCAGCCCACT GCCCCTGCCC CTACTCCCTA CCCCTGCCCC 1260 ACAGACACAG CCAAGCCTCA GGAGGACTCA ACCCACAGGA ATGTGGGCAA TGAGCAGGCT 1320 GCGCTCGGAG GACCCCGCTA TCCCAGCCCT GGGCTCTGCC GCCCTCTGGT GGCTGGGCTG 1380 GGAAGGATGC TGCTCCCATT ACTGCCGTTG TAGAACCGCA ATTGCCCTAA AAAAATAAAA 1440 TGCTGTTGCT GCTACTCATG ATGATGACGA TGATGGCGAT GACGATGATG ATGATATTCA 1500 TTGCTTTATG GTTTGCCAAG TACCTTCTCC GTCAATCATA GGCTGCACCA AACAGAGTGC 1560 AGGGTTCTGG ACTGAAATCA GATGGGAATG TAAGTCCCTA GTCAAGTTCC AACTGATTAT 1620 GTGACCTTGG GCAAGTCATG TCACTTCCTT GAGCCTCAGA CTCCTCATCT GTGGAACGGG 1680 GTGACAAAAA TAGGGTTGTT ATAAGGATTA AAAGACCTAA CACCTGGCCG GGCGTGGTGA 1740 CTCATGCCTG TAACACCAGC ACTTTGGGAG GCCGAGGTAG GAGGACTGCT TGAGCTCAGG 1800 AGTTTGAGAC CAGCCCGGGC AAATGGTGAA ACCCCACCTC CACTAAAAAT ACAAAAAATA 1860 GCCAAGCATG TTGGCACATG CCTGTAATTC CAGCTACTCA GGAGGCCGAG ACTTGAGAAT 1920 CGCTTGAACC CAGGAGGTGG AGATTGCAGT GAGCCTAGAT CACACCACTG CACTCCAGCC 1980 TGGGCGACAG AATGAGACTC TGTCAAAAAC AAAACAAACA ACAACAACAA CAACAAACCA 2040 TCTATTGAAC TAAATTGGCC TCCAAAATAT ACCCTTCTGG AATTTAGGTG GCTATTAAAA 2100 GACCTAACAC CTGGCACTTG GGTTGGAGAG AATAACATGG CTGTCGTTAT ATACTAATCC 2160 TTGGCCAGTC TGTCCTGGGA GATCAACTCC CCTTTGCATA GGGCTTTTTC GAAGTCCTTT 2220 TCCAAGGCAT CACCTTCTTG TAGCTGCATT ATCATGCCCG TTTACCAGAT GAGGAAACTG 2280 AGGCTCAGAG AGGGGAAGCA GCTTGCCTAG AGCATCGTGG CTTATAAGTT AAAGCAAGAC 2340 TCAAGCCAGG TCCACCTGCC TCCAAACCCG GTGCTGGACT TTCCCACACC CTGCTTTGGA 2400 AACTCTAAGG AACCTTCCAA TCCCCCAAAT CCTATTGCCT CATTTAAGTA AAGCAGGCCT 2460 GGTTTCTGCC TCCTTCAGTG CCCCTCTTCT CCTCCCACAC CCTTCCAGCA GCCGAAACGC 2520 TAGACCCAAT AGCTTACCCC TTCCTCCTTC CTGACCAGCT CCCAACCCTC AGGGCAGCTC 2580 ATGAGCCAAG AGCTTGAGAG TGGCTTCCAA AGGTCATCCT CTCCACCCCG CTGTGCCCCA 2640 CCCAAGCAGA TGACTGTTCA TCCTGTTCTT CACGCTGCTC AGGGGAAGAA ATTCCCCAGC 2700 TTCACTCCCT CCACTCGCCC AGGTGTCTGA GACAGTTCCC ACAGTTGGCA AACTCTGCCT 2760 TAAGTCCCAC CAGAGTCCCT CCTGCTACAA CGTCAGCCCA TTTATTTTAG TTCTTTCTCC 2820 CAGTAGCATC AGAAATACAA TCTGGGGGGA GACAAACGCC GGGAGAGTGG GATCCTGGGA 2880 AGGGGAAGGC ACACTTGGGG ACAGGAAGTG AGAGCAAACC CAGGTTCAAA TCCCGGTCAG 2940 GGTGACAAGA GTGGCCAAGC GAGGCCAGGC GCAGTGGTTC ACACCTGTAA TCTTAGCACT 3000 CTGGGAGGCT GAGGGGGGCA GATCACTTGA GGTCAGAAGT TCGAGACCAG CCTGACCAAC 3060 ATGGTGAAAC TCCGTGTCTA CTAAAAATAT AAAACTTAGC TGGGCGCTGT GGTGGGCGCC 3120 TGTAATCCCA GCTACTCAGG AGGCTGAGGC AGGAGAATCG CTTGAACCCA GGAGGCAGAG 3180 GTTGCAGTGA CCCAGAATGG TGCCACTGCA CTCTAGTCTG GGCGACAGAG TGAGACTTCA 3240 TCTAAAAAAA AAAAAAAAAA GAGCGGCCCA GTGGGTCTCC TGGTGTCCAG GGCAGTCTCA 3300 GCCCAGATGG GGCAGCCCCG CCCACAGCCC GAGGGCATCC AGACCCTCCA CCCCACCATA 3360 CTGGCACCAA GTAGCTCAAA TGAGGGAAGA GAGCTGGGGT GGGACTTGGA AGCAGAGCGG 3420 GTCTGAGGGG CAATTATGAG CTCGGGCTCA GGGTTCATGC AGAGCCGGGC TCAGACCCAG 3480 CAACAAATAT TCACTGAGCT GCTCCTGGGT TCCAGGCATG GCAGTTGGCA ATGAGGCCAC 3540 AGCACTGGGA AGACAGCCAG AGGCCCTTTC TTCATGGATT TCACGGTCCA GTGGGGGAGA 3600 CAACAGAAAA CAGGTCACCA CATGGATCAA CAAGGAATCC CAGAGTGGCC ACTCGGCTCT 3660 GCACTGTCCC CCTCCTGTCA CCTCCATTTC AGCTCTCAGG ATGCAGCTTC AGTGGCACCA 3720 CCTCCAGGAA GCCCACCCTG ACTGCCAGTG AGGACAGGCT GCTCCCTTAT TTGTGCCCCC 3780 ACAGCCCCAC AGTTTGCACT GTGTAAGCTT TCAGCTGAAA TTTAACTCCC ATGCAGAAAA 3840 GCACACAGAT CTTAGGCGCC CAGCCTGATG GACTGGTCCC AAAGTGCACA GCCCTGTGGA 3900 AGCAACATCA GCAGTCCCTC CCTAAGCAGT CACTACTTCA GCTGCAGGCG CTCCCCACCC 3960 TGACCTCGAT CCATCAATTA GTCTGCCTGG TTTTGTACTT TATGCAAATC AACTAATTTG 4020 TTTTGTTGTT GTTTTTTTTT TTTTTTGGCG TCTGGCTTCT CTCACGTTCA GTCTAGATTC 4080 GCCTATGCAG ACACAGACAG TACTTGTAGT TGTAGACAGT TTAGTCTCGT GACTGTGTAG 4140 TGTTCCACTG TGTGAATATA CCAGGATTTT CATTTTACTA TTGATGAGCA TTTGGGTAGT 4200 TTCTAGCATT TTGGCTATTA ATGGATAATA CTGCTAAAAA CATGCTAATT CAGGTCTTTT 4260 TGGGCACATA TGTACCCATT TCTGTTGGGT GTATACCCAA AGAAAGCAGT GGAATGTCTG 4320 GGTCATAGCA TAGGCAAGTT CAGCTTTTGC AGATGCAGCC AAGCTGTTTT CCAAAGTAGC 4380 TGTGCCAATT CACACCCCAC CAACAGTGTA GAATTCCTGC TGCCCCACAT CCTGACAACA 4440 CTCTGTGTGG GGCCCTGCAC TTCACCTGTT TACTTGTCTG TCTCACCATT AGGGAGTGTC 4500 ACCAAGGATG GGGATGCTGC TGATGTCCTT TGGTCCATAG GTGACACAAT CAGAGAGGAG 4560
|