EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-00323

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr1:12556480-12557260

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT1

MA0137.3

chr1:12556742-12556753

TTTCTAGGAAA

6.14

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_00009	chr1:12555946-12557524	Adipose_Nuclei
SE_01743	chr1:12555539-12557934	Aorta
SE_15154	chr1:12553585-12557831	CD4_Memory_Primary_7pool
SE_28215	chr1:12555763-12557684	Fetal_Intestine
SE_39882	chr1:12555412-12558024	K562
SE_41209	chr1:12555364-12557258	Left_Ventricle
SE_41810	chr1:12556272-12556638	LNCaP
SE_42647	chr1:12555666-12557328	Lung
SE_49026	chr1:12555574-12557428	Right_Atrium
SE_54847	chr1:12554319-12557789	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I012495

chr1

12555443

12557768

Enhancer Sequence

CCTGACTTGC CCACCAGGGC ACTTTCTGCC CTTGTAAGTA AATCTCTATG CTGCTTACTG 60
TTAGTTCCTG TTTCTGAAGT GCTGATTCGA TGTGTAAGGC TTCTCCTCTC TTTTAGATCT 120
GTCTAGAGAG GAGTGTTTTG CTTCAGTGAG CTCCAGGAAC AAATAATAAG TACAGCAAGT 180
ACAAGGCCGA GGACAGACCC AGTGCACTCT TATCAGTCAT CTGAAATATG CACAGCCTTT 240
CCAAGACAAA TGTGCACTCC TGTTTCTAGG AAAACACCAG AAAGTACTTA CCAATTACCC 300
TGTATATGCT GTGTGGAAAA AGACAACATC AGCCTACCCT GAAAGCCATA ACAAAGCAGA 360
TTCCTCCGGG CCGCCGACAG CTGAGTGGCC CGAGTTAGAG CCTCTGCAGA ATCCCAGCCT 420
GTGGCCTGGG CCAGGTCCAG GTCCAGGTCC AGGTCCAGGT CCAGGTCCAG GTCCAGGGGG 480
CATTCTTCCC CTCGCATGAT TACCACGTCC CTCACCCTTT GCCCAAGGAA CTGACCTCAT 540
CTTAGAAGAA GTCTCAAGGG TTGGTGTGTT CTTACTAAGT GCCCAGGATT TTCTTCCAGA 600
CCCATCACAA ATCCAAAGAT GGCTCTCCTG AAGAGAGGCC TAAAAAAGAG GGTGCGGCCC 660
AGGGGGATCT ATTATAGTAA TAACCGCAGG AACGAGAGCC GCCGCTGGTG GGCAGCTCAC 720
CATCCGCCAG GAGCAGGCTT GGCGGGCACT GTTTTATTTG GTCTTCACAG CAGTCCTCTA 780