EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS002-01095

Organism

Homo sapiens

Tissue/cell

A375

Coordinate

chr1:212739470-212740910

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:212740453-212740464	TCTTCCCGCCC	-	6.14
NFIC	MA0161.2	chr1:212739498-212739509	TCTGCCAAGTA	-	6.62
ZEB1	MA0103.3	chr1:212739850-212739861	GGGCAGGTGGG	-	6.14

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_24164	chr1:212739774-212740739	Colon_Crypt_2
SE_24934	chr1:212739739-212740967	Colon_Crypt_3
SE_59599	chr1:212731013-212744576	Ly3

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I212565

chr1

212739338

212741541

Enhancer Sequence

GGTCAGGAGA TCTTGTTTGG CAGCTGGTTC TGCCAAGTAA AAGCTGTGTG ACCTTGGGCA 60
AGTCATTGTT TCTCTTTAAG TTTTGGTTAC TCCTCTCATC TGTAAAAACA TGTGCACTTG 120
GGGTTCTTCC AGCCCCACTA GTCCTCTTCT GTCCTTTAAG TGTGGATCTG TGGTTCTGTT 180
GTTGGCACAC CAGAAAGGGC ACAAGTTTGA GTGTCTGGCT CTGCCATTTG CTGTGCGACC 240
TTGGACAAGG ACACCCCTTC TCTGAAACTC AATTTTCCCA TTTATAAAAT ATGGGTTATT 300
ATGAGACATC AGTGAGGATG AAGCTGAGAG CCTTTTCAGA GGCACAATGT GGATGTAAAG 360
CAACACCCTG AGTTTGGACA GGGCAGGTGG GGTAAGGCAG GCTGAGGGGT GATGTTTGGG 420
GTTACTGGCA GGTTGAACTG TGACCAGGGC ATAGAGGGGG TGGAGGTCAC GGTCAGCTGT 480
GCCATAGAAA CCTCCTGCCC TGTCCTGCTC AGTTCCTGTT CCTTTCCCAG CAGCCGAGGA 540
AGGGGAAACA GTTGAGAGGT TATAAATGAC GCTGAAAACA GCTCACAAAA GTGTCTGAGG 600
GGGTCATGCT GCTGGAGCAA AGCACGCGCT GGGAAGCCCA TCCAGGGTCT GGGGACCCCT 660
GAAAATTGAG CAGCCTCCTG GTTCCTATTG GTGCCCAAGA GGATGCACCT CCTGCACTGC 720
TTGGCATCAC TTCCTGGGAA AGTAAAACCT CGTACGGCGA GTAATGGATC ACAACTGAAC 780
AGTGACCAGA GTGACCTGTC TCGAGCCATC TCTGAGGGAA AGTCACAGAT TCCCTAGAGA 840
AAGTCTCCAA ATTCCTGTTT ATTCTTCACA TAAACAGATT AACCTAGGGG TAGCGATTTT 900
ACTTAACTCT TCCTTTCATG TTGCAGCGAA AGCGAAATTG GCCACTTCTT TGAAGCTGTT 960
CTTTGAGCCA TAAATATAAT TTCTCTTCCC GCCCACAGAA AGGGGTTTTC TTTTTCTTTC 1020
TTTCTCTCTT TTTTCTTTTT TTTTTTGAAG CCCCAGGCAC TGAGACGTTC AGAGGTTGGC 1080
AGGAGGTGCA GCTGCCGTAG GAGCAGCATG CTGTCCCCCT GCTGACTCAT CTGACATTAA 1140
CATAATTATG TTTCAGAAGT CAAAGTGATT TTCAAACTAT GAGTAATGCA GGGTGTTAGA 1200
GAGAGTGTTT ACACGGCAGT GGGCATTTCA GCACACTCAA GAAACCAGCT GCTGTTAACA 1260
GCTGCAATGA GTGAAGAAAT AAGAAAATGC TCTCAGGAAA AACAGCCCTT CTCTCTTGTC 1320
TCTGTTTCTG TGCAAAGGAT TCAGATGTCA TGAAAGGCAG GTGAACTTAA GAGTTCCCTG 1380
AGGACCAATC CAGATCTAGC ATTGTTATCT GAATGCCTTG ATGTCTGATC TTTTTATAGG 1440