Tag | Content |
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EnhancerAtlas ID | HS002-00193 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr1:25890280-25891040 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RARA(var.2) | MA0730.1 | chr1:25890322-25890339 | TGACCTCTGGGTGAGCC | - | 6.08 |
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| Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
SE_02010 | chr1:25890927-25896559 | Aorta | SE_03472 | chr1:25886787-25890526 | Brain_Angular_Gyrus | SE_03472 | chr1:25890604-25897057 | Brain_Angular_Gyrus | SE_04384 | chr1:25883710-25897130 | Brain_Anterior_Caudate | SE_05146 | chr1:25875255-25899602 | Brain_Cingulate_Gyrus | SE_05991 | chr1:25873945-25899913 | Brain_Hippocampus_Middle | SE_06990 | chr1:25882590-25898188 | Brain_Hippocampus_Middle_150 | SE_08141 | chr1:25882606-25897422 | Brain_Inferior_Temporal_Lobe | SE_15269 | chr1:25881504-25892507 | CD4_Memory_Primary_7pool | SE_16249 | chr1:25886217-25892811 | CD4_Naive_Primary_7pool | SE_17633 | chr1:25869448-25897028 | CD4p_CD25-_CD45RAp_Naive | SE_19031 | chr1:25874010-25893424 | CD4p_CD25-_Il17-_PMAstim_Th | SE_24457 | chr1:25890007-25890719 | Colon_Crypt_2 | SE_53664 | chr1:25874991-25896829 | Spleen | SE_65397 | chr1:25887914-25896024 | Pancreatic_islets |
|
| Number: 3 | ID | Chromosome | Start | End |
GH01I025563 | chr1 | 25890441 | 25890490 | GH01I025564 | chr1 | 25890883 | 25890910 | GH01I025559 | chr1 | 25886294 | 25890330 |
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Enhancer Sequence | GGGTGAGTGG TTGTGTGGCC AGCAGATCGG TGATCCTCAG CCTGACCTCT GGGTGAGCCT 60 GGGGCTGCTC CAGGGACCAG GCCCTGGGAC CCGTGACTTG TGGGCCTCTG GGAGGACCAG 120 ACCCAGCCCG GTAGTGCCCA GGCGCAGGAT AGGGGATGAA CAATGTCCCT TTTGAACCTG 180 AGGCTGCATC CCCAACAGGC TTGGCTCCCA GCACAGCTGT CTCCTCACAA TGCTTGGCCT 240 CTTGGCCTGA GCGTCCACGG CTCTGCCCAC CACAAGACCA GCCAAAGGCG CCCTTGTTCT 300 TGGTGTGGCA GAGCTCGCTC CTACCACCCC TCCCCCTCAG CCGCCTGAAT GAGGACCCAG 360 AGACTTGGGC AGTCACCAGC TTGGTCCCTG ACTCCCTCAG GGACTCAGGG CAAGCCCCCT 420 GACCTCTCTG TCTCAGCTTT TTCATCTCAG TAAGGGTGAT GACCTCTGCC AACGGAATCT 480 CCCCGAGGAA CCTGAAATTT AATTTTAATT TTTCATTTGG AAATAATTTC AGACTGTGTT 540 ACAAAATTAG TACAGAGAAT TCCTGTTCAC CCGTCATCCA GATTCCCCAA TTGTTAACAT 600 CTTGCATGAC CACATTACAC TGGTCAGAAT CAGGAAACAA ACACGATACT GTGCTGTTAT 660 ATAATCTATA GAACTTACAC ATTTCTCCAG GTGCCCCTTC AGTGTCCTGT TTCTGGCCCA 720 GGATCCATTG CAGAATCACA TGTTAACTTG TCGTCTCTTT 760
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