EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS002-00019

Organism

Homo sapiens

Tissue/cell

A375

Coordinate

chr1:2343380-2343820

Target genes

Number: 11
Name	Ensembl ID

RP11	ENSG00000182873
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RP4	ENSG00000238240
AL513477.1	ENSG00000178642
MORN1	ENSG00000116151
RER1	ENSG00000157916
PEX10	ENSG00000157911
PLCH2	ENSG00000149527
RP3	ENSG00000224387

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_24340	chr1:2343111-2346064	Colon_Crypt_2
SE_25169	chr1:2343208-2346524	Colon_Crypt_3
SE_27514	chr1:2343120-2346479	Esophagus
SE_41711	chr1:2342986-2346400	LNCaP

Enhancer Sequence

AAGGCCGGGG TCAGTGTGAA CCGGACCGAG GTATGAGGCG TTCGCGCCGC GGGCGCTCTG 60
ACCCCTCTGC TCACAGGGGA GGATCGGAGG GAGGCTTGAA GCACTTGCCA AGGCCTCACA 120
CCTGGAGGGG ACAGAGTCTT CCCCAGCCGC TGGCGTCAGC TGGACCTGCC CTGAGCTGGG 180
GACGGGAAGG GCTTGGGCGG GAACTGGAGG CCCACGCAGG TCCCCCGCGG TGTCTGCGGC 240
CTGTGCCTCT GGGGCCACCT GGCCAGGGAG GGCAGGAGGT GCCCCGCACA TCCCTGAATG 300
GCCGCAGGGC AGGCGAAGGA GACTGCCGGG TCCCAGGTTG TGGGACGGGC CCAGGCGACC 360
GTGACCACAC ACGGCAGACA CCCCGCCTCC ATGAGGGGCA ACACCCCCTG GGCCGCTCGC 420
GAGGACGTCC GGCCGCGCCC 440